prot_Ecto-sp13_S_contig662.17479.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: D7FIP2_ECTSI (Pre-mRNA-splicing factor 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP2_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 5.580e-20 Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKVR 47
GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKVR
Sbjct: 394 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKVR 440
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: A0A836CGW5_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW5_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.350e-15 Identity = 37/46 (80.43%), Postives = 43/46 (93.48%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKV 46
GRE+I S+NVAHIMNNEAQRKYLVS+KRLMT+LQ+KR D+ PSKKV
Sbjct: 190 GREKIESRNVAHIMNNEAQRKYLVSIKRLMTWLQEKRTDVPPSKKV 235
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: A0A482UP73_9ARCH (Prp18 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UP73_9ARCH) HSP 1 Score: 70.9 bits (172), Expect = 9.760e-15 Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKV 46
GRERIS+ VAHIMNNE++RKYL SVKRLMT+ Q KRPD+APS KV
Sbjct: 58 GRERISTSKVAHIMNNESERKYLTSVKRLMTFAQSKRPDVAPSMKV 103
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: A0A4D9CN32_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CN32_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.300e-13 Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKK 45
GRE+ISS VAHIMNNE QRKYL S+KRLM + Q+KRPD+ PSKK
Sbjct: 73 GREKISSSKVAHIMNNEMQRKYLTSIKRLMRFAQEKRPDVDPSKK 117
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: W7U1L9_9STRA (Pre-mRNA-splicing factor 18 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1L9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.470e-13 Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKK 45
GRE+ISS VAHIMNNE QRKYL S+KRLM + Q+KRPD+ PSKK
Sbjct: 76 GREKISSSKVAHIMNNEMQRKYLTSIKRLMRFAQEKRPDVDPSKK 120
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: A0A7R9UDV4_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDV4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.950e-13 Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKV 46
GRE+ISSKNVAHIMNNE QRKYL SVKRLM Y Q +RPD+ PS KV
Sbjct: 356 GREKISSKNVAHIMNNELQRKYLTSVKRLMNYAQRRRPDVPPSMKV 401
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: A0A7S2Y0T3_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T3_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.410e-13 Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKV 46
G ++I+ KNVAH+MNNEAQRK+L S+KRLM Y Q KRPD+ PSKKV
Sbjct: 70 GHDKINVKNVAHVMNNEAQRKFLTSIKRLMRYNQTKRPDVPPSKKV 115
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: F0YA06_AURAN (Pre-mRNA-splicing factor 18 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA06_AURAN) HSP 1 Score: 68.2 bits (165), Expect = 3.220e-12 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0
Query: 2 RERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKV 46
RE + KNVAH+MNNE QRKYL S+KRLM + QD+RPD+APSKKV
Sbjct: 299 RENVEQKNVAHVMNNEMQRKYLTSMKRLMKFAQDQRPDVAPSKKV 343
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: A0A7S4E8L3_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8L3_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.680e-12 Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0
Query: 2 RERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKV 46
RE++ KNVAH+MN+EAQRKYL S KRLM + QD+RPD+APSKKV
Sbjct: 260 REKVEQKNVAHVMNDEAQRKYLTSFKRLMKFEQDRRPDVAPSKKV 304
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Match: K0TC31_THAOC (Pre-mRNA-splicing factor 18 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TC31_THAOC) HSP 1 Score: 67.8 bits (164), Expect = 4.890e-12 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0
Query: 1 GRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKVR 47
GR RI S NVAH+MN+E RKYL SVKRLM Y Q+KRPD+ PSKKVR
Sbjct: 334 GRARIESSNVAHVMNSELHRKYLTSVKRLMRYAQNKRPDVNPSKKVR 380 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig662.17479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig662.17479.1 ID=prot_Ecto-sp13_S_contig662.17479.1|Name=mRNA_Ecto-sp13_S_contig662.17479.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bpback to top |