prot_Ecto-sp13_S_contig6615.17467.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6615.17467.1
Unique Nameprot_Ecto-sp13_S_contig6615.17467.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: D7FP98_ECTSI (Flagellar radial spoke protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP98_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 9.790e-110
Identity = 172/190 (90.53%), Postives = 174/190 (91.58%), Query Frame = 0
Query:    1 MPAPPAYEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTVEKKSRKRLGQSRSRGSSSSFFDTRASQPVLGEELDLSRYLVESGGAAARPEREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            MPAPPAYEFSSQPR VKTRP  KQQ R+DV VG GG+G GNAGARYDPFFPINIHHDPRVARGNTFAGDRRDA P AEPGPKTV KKSRKRLGQSRSRGSSSSFFDTRASQPVL EELDLSRYLVE G  AARPEREADTQTDDF ER QTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK
Sbjct:    1 MPAPPAYEFSSQPRPVKTRPHNKQQSRRDV-VGSGGNGNGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAQPSAEPGPKTVAKKSRKRLGQSRSRGSSSSFFDTRASQPVLREELDLSRYLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 189          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A6H5KBC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC6_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.070e-32
Identity = 64/69 (92.75%), Postives = 64/69 (92.75%), Query Frame = 0
Query:  123 YLVESGGAAARPEREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 191
            YLVE G  AARPEREADTQTDDF ER QTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV
Sbjct:   20 YLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 88          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A7S1CEJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEJ9_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 9.700e-17
Identity = 69/189 (36.51%), Postives = 97/189 (51.32%), Query Frame = 0
Query:    7 YEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTV--EKKSRKRLGQSRSRGSSSSFFDTRASQPVLGE---ELDLSRYLVESGGAAARPEREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            YEF+  P +V   P K+  +R+ +                 P   +NI HDPRV RGNT+A      PP A+   + V  E ++R+R  ++  RG   +    R  +PV G    ++    YL E       PE +  TQT+ F +R  +P F+P KTG DA TQIE  + LFDF+ EV+P+L VLVGK
Sbjct:    9 YEFAQPPAAV---PHKRAPYREPL-----------------PDASMNIMHDPRVVRGNTYAAHV--LPPSAQAEQERVAGEMEARRRRMEATRRGKEVAM--PRTPEPVDGRRHVDIQTENYLEELSDRV--PEVDDSTQTEAFMDRPPSPLFIPTKTGTDAQTQIEAGE-LFDFDLEVEPILEVLVGK 170          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A2R5GH80_9STRA (Radial spoke head protein 3-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GH80_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 5.500e-16
Identity = 67/189 (35.45%), Postives = 93/189 (49.21%), Query Frame = 0
Query:    7 YEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPK--TVEKKSRKRLGQSRSRGSSSSFFDTRASQPVLGE---ELDLSRYLVESGGAAARPEREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            Y FS++P  V+     +  +RQD                 D    +NI +D RV RG+T++   +        GP       K   +  +  S+ S+S      A +P LG    ++    YL E       PE E +TQTD F +R   P FVP KTG+DA TQ+EV D+LFDF+AEV+P+L VLVGK
Sbjct:    6 YTFSAKPTPVQAGRKARGGYRQDDD---------------DAVDSVNIMYDRRVYRGSTYSSHSKGKADLLRRGPAGGRARGKGASQALEQASKESTSFPISGEAPEPGLGRRDMDVQTETYLEELTDKV--PETETETQTDPFMDRPSLPLFVPFKTGIDAETQVEV-DELFDFDAEVEPILEVLVGK 176          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A7K5TH70_9FRIN (RSPH3 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K5TH70_9FRIN)

HSP 1 Score: 81.3 bits (199), Expect = 1.300e-14
Identity = 72/192 (37.50%), Postives = 92/192 (47.92%), Query Frame = 0
Query:    2 PAPPAYEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTVEKKSRKRLGQSRSRGSSSSFFDTRASQPVLGEE---LDLSRYLVESGGAAARPEREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            PA   Y FSSQPRS+ +RP  +QQ        G          RY      NI  DPRV RGN  +   R  PP       T E K ++R  +  +R  +         +PV G E   +    YL E        E + + QTDDF +R  TP F+P K+G D  TQIE  + LFDF+ EV+P+L VLVGK
Sbjct:   12 PADGPYSFSSQPRSLPSRPKYRQQSNAAETEKGP--------VRYG-----NIMVDPRVVRGNVLSV--RPPPPQLH----TPEAKRQRRAQKQLARKLTQEQIQPGTPEPVEGREHVHVQTELYLEEISDRII--EVDGECQTDDFLDRPPTPLFIPAKSGKDVATQIEKGE-LFDFDIEVKPILEVLVGK 181          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A6I9HH28_GEOFO (radial spoke head protein 3 homolog n=12 Tax=Passeriformes TaxID=9126 RepID=A0A6I9HH28_GEOFO)

HSP 1 Score: 77.8 bits (190), Expect = 2.140e-13
Identity = 69/188 (36.70%), Postives = 95/188 (50.53%), Query Frame = 0
Query:    7 YEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTVEKKSRKRLGQ-SRSRGSSSSFFDTRASQPVLGE---ELDLSRYLVESGGAAARPEREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            Y FSSQPRS+ +RP  ++Q           S       RY      NI  DPRV RGN  +   R +PP +   P T+E K +KR  + +++R  +         +PV G     +    YL E        E + + QTD+F +R  TP F+P K+G D  TQIE  + LFDF+ EV+P+L VLVGK
Sbjct:   16 YSFSSQPRSLPSRPKYREQS----------SAAETEKVRYG-----NIMIDPRVVRGNVLSA--RPSPPQSTE-PLTLEVKRQKRAQKHTQARRLTQEQIRPGTPEPVEGRVHVHVQTELYLEEISDRII--EVDGECQTDEFLDRPPTPLFIPAKSGKDVATQIEKGE-LFDFDIEVKPILEVLVGK 182          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A383WN54_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WN54_TETOB)

HSP 1 Score: 78.2 bits (191), Expect = 2.290e-13
Identity = 69/193 (35.75%), Postives = 96/193 (49.74%), Query Frame = 0
Query:    7 YEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPF-FPINIHHDPRVARGNTFAGDRRDAPPF----AEPGPKTVEKKSRKRLGQSRSRGSSSSFFDTRASQPVLGE---ELDLSRYLVESGGAAARPEREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 191
            Y  +++P++V+ R   + ++R+D                 DP   P NI  D RV RGNT+A     A P     ++PG  T    +R+  G+ R+             +PV G    ++    YL E       PE +  TQTD F +R  TP FVP K+G DA TQIE  + LFDF+AEV+P+L VLVGKV
Sbjct:   12 YSHAAEPKAVQQR---RAKYRED-----------------DPTAIPSNIMFDRRVVRGNTYAARILPAEPVLHLTSKPGG-TSAAAARRAPGRPRT---------ISTPEPVEGRRHMDVQTDVYLEELTDVV--PEADTTTQTDAFLDRPPTPQFVPTKSGTDAATQIEQGE-LFDFDAEVEPLLEVLVGKV 171          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A7S1H829_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H829_HEMAN)

HSP 1 Score: 76.3 bits (186), Expect = 2.540e-13
Identity = 71/194 (36.60%), Postives = 95/194 (48.97%), Query Frame = 0
Query:    7 YEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTVEKKS------RKRLGQSRSRGSS---SSFFDTRASQPVLGEELDLSRYLVESGGAAARP-EREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            Y FS QPR+V +     Q++R   L               D    +NI  D RV RGNT+A     A    +   +++  +S      RKR+G     GSS   SS  D   ++     E++   +L E      RP E + DTQTD F +R  +P FVP KTGVD  TQI   D LF F+AEV+P+L V+VGK
Sbjct:   12 YAFSQQPRAVSSGRGATQKYRDPNLA--------------DDRLAVNIMWDRRVVRGNTYAAQVLPAVHVPDQTSQSLGDRSTRGGTVRKRMGGGGEVGSSFPHSSLGDDLVNKQK-NLEVNTENFLEE---ILDRPIESDVDTQTDVFMDRPPSPLFVPAKTGVDRETQIFEGD-LFVFDAEVEPILQVIVGK 186          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A7S4BFI4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BFI4_CHRCT)

HSP 1 Score: 76.6 bits (187), Expect = 5.250e-13
Identity = 65/188 (34.57%), Postives = 92/188 (48.94%), Query Frame = 0
Query:    7 YEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTVEKKSRKRLGQSRSRGSSSSFFDTRASQPVLGE---ELDLSRYLVESGGAAARP-EREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            Y  S++P +V  R   ++  ++D +V                    NI  D RV RGNT+A      P  A+     +E+   K LG+S  R   +   +     PV G    ++   +YL E      RP E + DTQTD F ++   P F+P KTGVD  TQ+E   +LFDF+AEV+P+L VLVGK
Sbjct:    8 YSHSTKPHTVAARKKYREPQQEDGMVSAN-----------------NIMFDKRVVRGNTYAAQI--LPATAQTEQLELERNKTKNLGRSTKRIKPAQRQED--VDPVEGRKHIDVQTEQYLEE---LTDRPIETDVDTQTDAFLDQLPAPIFIPMKTGVDVETQVE-DGELFDFDAEVEPILEVLVGK 170          
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Match: A0A7S1H5L5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H5L5_HEMAN)

HSP 1 Score: 76.3 bits (186), Expect = 7.640e-13
Identity = 71/194 (36.60%), Postives = 95/194 (48.97%), Query Frame = 0
Query:    7 YEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFFPINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTVEKKS------RKRLGQSRSRGSS---SSFFDTRASQPVLGEELDLSRYLVESGGAAARP-EREADTQTDDFHERSQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 190
            Y FS QPR+V +     Q++R   L               D    +NI  D RV RGNT+A     A    +   +++  +S      RKR+G     GSS   SS  D   ++     E++   +L E      RP E + DTQTD F +R  +P FVP KTGVD  TQI   D LF F+AEV+P+L V+VGK
Sbjct:   12 YAFSQQPRAVSSGRGATQKYRDPNLA--------------DDRLAVNIMWDRRVVRGNTYAAQVLPAVHVPDQTSQSLGDRSTRGGTVRKRMGGGGEVGSSFPHSSLGDDLVNKQK-NLEVNTENFLEE---ILDRPIESDVDTQTDVFMDRPPSPLFVPAKTGVDRETQIFEGD-LFVFDAEVEPILQVIVGK 186          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6615.17467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP98_ECTSI9.790e-11090.53Flagellar radial spoke protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KBC6_9PHAE1.070e-3292.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1CEJ9_9STRA9.700e-1736.51Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2R5GH80_9STRA5.500e-1635.45Radial spoke head protein 3-like n=1 Tax=Hondaea f... [more]
A0A7K5TH70_9FRIN1.300e-1437.50RSPH3 protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
A0A6I9HH28_GEOFO2.140e-1336.70radial spoke head protein 3 homolog n=12 Tax=Passe... [more]
A0A383WN54_TETOB2.290e-1335.75Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S1H829_HEMAN2.540e-1336.60Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4BFI4_CHRCT5.250e-1334.57Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S1H5L5_HEMAN7.640e-1336.60Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009290Radial spoke 3PFAMPF06098Radial_spoke_3coord: 52..191
e-value: 2.7E-33
score: 115.5
IPR009290Radial spoke 3PANTHERPTHR21648FLAGELLAR RADIAL SPOKE PROTEIN 3coord: 6..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6615contigEcto-sp13_S_contig6615:6317..7983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6615.17467.1mRNA_Ecto-sp13_S_contig6615.17467.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6615 6317..7983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6615.17467.1 ID=prot_Ecto-sp13_S_contig6615.17467.1|Name=mRNA_Ecto-sp13_S_contig6615.17467.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
MPAPPAYEFSSQPRSVKTRPDKKQQFRQDVLVGGGGSGKGNAGARYDPFF
PINIHHDPRVARGNTFAGDRRDAPPFAEPGPKTVEKKSRKRLGQSRSRGS
SSSFFDTRASQPVLGEELDLSRYLVESGGAAARPEREADTQTDDFHERSQ
TPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKVRGTLNFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009290Radial_spoke_3