prot_Ecto-sp13_S_contig65967.17438.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65967.17438.1
Unique Nameprot_Ecto-sp13_S_contig65967.17438.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
BLAST of mRNA_Ecto-sp13_S_contig65967.17438.1 vs. uniprot
Match: D8LQD6_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD6_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.040e-18
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
Query:    1 MLDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGV 39
            MLDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGV
Sbjct:  218 MLDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGV 256          
BLAST of mRNA_Ecto-sp13_S_contig65967.17438.1 vs. uniprot
Match: A0A6H5KU08_9PHAE (HIT-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU08_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 6.340e-17
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 0
Query:    1 MLDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGV 39
            +L LLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGV
Sbjct:  381 ILGLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGV 419          
BLAST of mRNA_Ecto-sp13_S_contig65967.17438.1 vs. uniprot
Match: A0A067CML1_SAPPC (HIT-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CML1_SAPPC)

HSP 1 Score: 53.9 bits (128), Expect = 2.710e-7
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    2 LDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQA 36
            LD LT +E+ +F REVA GRLGKLI  W PWWT +
Sbjct:  146 LDALTPDERAQFLREVADGRLGKLIALWTPWWTSS 180          
BLAST of mRNA_Ecto-sp13_S_contig65967.17438.1 vs. uniprot
Match: T0Q3L4_SAPDV (HIT-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q3L4_SAPDV)

HSP 1 Score: 52.8 bits (125), Expect = 6.950e-7
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    2 LDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQA 36
            LD LT  E+ +F REVA GRLGKLI  W PWWT +
Sbjct:  146 LDALTPNERAQFLREVADGRLGKLIALWTPWWTTS 180          
BLAST of mRNA_Ecto-sp13_S_contig65967.17438.1 vs. uniprot
Match: A0A0P1B0H6_PLAHL (Predicted Zn-finger protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0H6_PLAHL)

HSP 1 Score: 52.0 bits (123), Expect = 1.300e-6
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    3 DLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQA 36
            D LTEEEK +F REVA GRLGKL+  W PWW  +
Sbjct:  151 DSLTEEEKRKFLREVADGRLGKLVELWSPWWLMS 184          
BLAST of mRNA_Ecto-sp13_S_contig65967.17438.1 vs. uniprot
Match: A0A3M6VK14_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK14_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 5.590e-5
Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 0
Query:    2 LDLLTEEEKGRFFREVASGRLGKLIVPWVPWW 33
            L+ LT EE+  F REVA GRLGKL+  W PWW
Sbjct:   64 LESLTAEERKTFLREVADGRLGKLVGLWTPWW 95          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65967.17438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LQD6_ECTSI2.040e-18100.00HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KU08_9PHAE6.340e-1794.87HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A067CML1_SAPPC2.710e-762.86HIT-type domain-containing protein n=1 Tax=Saprole... [more]
T0Q3L4_SAPDV6.950e-762.86HIT-type domain-containing protein n=1 Tax=Saprole... [more]
A0A0P1B0H6_PLAHL1.300e-664.71Predicted Zn-finger protein n=1 Tax=Plasmopara hal... [more]
A0A3M6VK14_9STRA5.590e-562.50Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65967contigEcto-sp13_S_contig65967:287..403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65967.17438.1mRNA_Ecto-sp13_S_contig65967.17438.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65967 260..403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65967.17438.1 ID=prot_Ecto-sp13_S_contig65967.17438.1|Name=mRNA_Ecto-sp13_S_contig65967.17438.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
MLDLLTEEEKGRFFREVASGRLGKLIVPWVPWWTQAAGV
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