prot_Ecto-sp13_S_contig65914.17431.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65914.17431.1
Unique Nameprot_Ecto-sp13_S_contig65914.17431.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length45
Homology
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: D7G3D6_ECTSI (Similar to Tigger transposable element-derived protein 6, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D6_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 9.020e-21
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFLKRYNYTHV LHGEAGDVDTAKVAEEIE+IREQ KEFDV
Sbjct:   58 WLHRFLKRYNYTHVKLHGEAGDVDTAKVAEEIEQIREQHKEFDV 101          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5JWH8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH8_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.870e-17
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFLKRY++THV LHGEAGDVD  KVAEEI+RIREQL+ FDV
Sbjct:   24 WLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIDRIREQLQVFDV 67          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5JPF0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF0_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 7.810e-17
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFLKRY++T V LHGEAGDVD  KVAEEIERIREQL+EFDV
Sbjct:  115 WLHRFLKRYSFTRVQLHGEAGDVDKQKVAEEIERIREQLQEFDV 158          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5K0Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y4_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.140e-16
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFLKRY++THV LHGEAGDVD  KVAEE ERIREQL+EFDV
Sbjct:  235 WLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEFERIREQLQEFDV 278          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.120e-16
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WL+RFLKRY++THV LHGEAGDVD  KVAEEIERIREQL+EFDV
Sbjct:  115 WLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDV 158          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5L7T1_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T1_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 2.990e-16
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFLKRY++THV LHGE GD D  KVAEEIERIREQL+EFDV
Sbjct:  231 WLHRFLKRYSFTHVQLHGEPGDEDNQKVAEEIERIREQLQEFDV 274          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.510e-16
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFLKRY++THV LHGEAGDVD  KVAEEIERIR+ L+EFDV
Sbjct:   94 WLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDV 137          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5JT55_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT55_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 3.870e-16
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFL RY++THV LHGEAGDVD  KVAEEIERIREQL+EFDV
Sbjct:  208 WLHRFLIRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDV 251          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5L5J7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J7_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 5.390e-16
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLH FLKRY++THV+LHG AGDVD  KVAEEIERIREQL+EFDV
Sbjct:  116 WLHGFLKRYSFTHVHLHGGAGDVDKQKVAEEIERIREQLQEFDV 159          
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Match: A0A6H5JQL2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQL2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.070e-15
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDV 44
            WLHRFLKRY   H+NLHGEAGDVD  KV E+I +IREQLKEFDV
Sbjct:   23 WLHRFLKRYQLKHINLHGEAGDVDQEKVQEKIAQIREQLKEFDV 66          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65914.17431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G3D6_ECTSI9.020e-2193.18Similar to Tigger transposable element-derived pro... [more]
A0A6H5JWH8_9PHAE5.870e-1781.82HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JPF0_9PHAE7.810e-1784.09HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5K0Y4_9PHAE1.140e-1684.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS8_9PHAE2.120e-1684.09HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5L7T1_9PHAE2.990e-1681.82HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5K051_9PHAE3.510e-1681.82HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JT55_9PHAE3.870e-1684.09HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5L5J7_9PHAE5.390e-1681.82DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQL2_9PHAE2.070e-1577.27HTH CENPB-type domain-containing protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006600HTH CenpB-type DNA-binding domainPROSITEPS51253HTH_CENPBcoord: 1..15
score: 8.721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65914contigEcto-sp13_S_contig65914:614..748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65914.17431.1mRNA_Ecto-sp13_S_contig65914.17431.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65914 614..748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65914.17431.1 ID=prot_Ecto-sp13_S_contig65914.17431.1|Name=mRNA_Ecto-sp13_S_contig65914.17431.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=45bp
WLHRFLKRYNYTHVNLHGEAGDVDTAKVAEEIERIREQLKEFDVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006600HTH_CenpB_DNA-bd_dom