prot_Ecto-sp13_S_contig65901.17429.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65901.17429.1
Unique Nameprot_Ecto-sp13_S_contig65901.17429.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length37
Homology
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: A0A2G1Z1V1_9PROT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2G1Z1V1_9PROT)

HSP 1 Score: 54.7 bits (130), Expect = 7.960e-8
Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDAYAGV 34
            YY +NP+RY FYR SCRRD++VE  WG++A+ G+
Sbjct:  179 YYQKNPIRYNFYRTSCRRDASVEALWGDEAHRGI 212          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: A0A2C9CQ59_9RHOB (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Monaibacterium marinum TaxID=1690039 RepID=A0A2C9CQ59_9RHOB)

HSP 1 Score: 51.6 bits (122), Expect = 9.730e-7
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDA 30
            YYL+NPLRY++YRASC RD  VER WGE A
Sbjct:  166 YYLKNPLRYRYYRASCGRDRQVERIWGEHA 195          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: A0A2E0IXN6_9GAMM (Peptide methionine sulfoxide reductase MsrA n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E0IXN6_9GAMM)

HSP 1 Score: 50.8 bits (120), Expect = 2.270e-6
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDA 30
            YY +N LRY+FYR SCRRD+T+E+RWGE A
Sbjct:  191 YYKKNSLRYKFYRNSCRRDATLEKRWGEVA 220          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: MSRA2_RHIME (Peptide methionine sulfoxide reductase MsrA 2 n=25 Tax=Sinorhizobium TaxID=28105 RepID=MSRA2_RHIME)

HSP 1 Score: 49.7 bits (117), Expect = 5.050e-6
Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 0
Query:    5 NPLRYQFYRASCRRDSTVERRWGEDAYAGVNH 36
            NP+RY +YR  C R+ TVE+ WG+ AYAGV+H
Sbjct:  167 NPIRYWYYRNGCGRNRTVEKLWGDRAYAGVSH 198          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: UPI0018F1F290 (peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Marinomonas sp. C1424 TaxID=2795388 RepID=UPI0018F1F290)

HSP 1 Score: 49.7 bits (117), Expect = 5.220e-6
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDA 30
            YY +NP+RY++YRASC RDS +ER WGE A
Sbjct:  170 YYKKNPIRYRYYRASCGRDSRIERLWGEVA 199          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: A0A2S6U5U8_9PROT (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6U5U8_9PROT)

HSP 1 Score: 49.7 bits (117), Expect = 5.710e-6
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDAYAGV 34
            YY  NP+RY+FYR SCRRD+ +   WG+DA  G+
Sbjct:  178 YYKVNPIRYKFYRYSCRRDARLNELWGKDALRGI 211          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: A0A6M1Y708_9GAMM (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Wenzhouxiangella sp. XN24 TaxID=2713569 RepID=A0A6M1Y708_9GAMM)

HSP 1 Score: 49.7 bits (117), Expect = 5.820e-6
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDA 30
            YYLENPLRY++YR SC RDS +E  WG++A
Sbjct:  186 YYLENPLRYRYYRFSCGRDSRLEEIWGDEA 215          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: A0A423Q0F8_9GAMM (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A423Q0F8_9GAMM)

HSP 1 Score: 48.1 bits (113), Expect = 2.260e-5
Identity = 18/28 (64.29%), Postives = 25/28 (89.29%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGE 28
            Y+ +NPLRY+FY+ASCRR++ +E RWGE
Sbjct:  195 YHEKNPLRYKFYKASCRREAVLEERWGE 222          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: U2FNK8_9GAMM (Peptide methionine sulfoxide reductase MsrA n=2 Tax=Salinisphaera shabanensis TaxID=180542 RepID=U2FNK8_9GAMM)

HSP 1 Score: 47.8 bits (112), Expect = 3.240e-5
Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDA 30
            YY +N LRY+FY+ SCRR +T+E+RWGE A
Sbjct:  201 YYQKNSLRYKFYKNSCRRTATLEKRWGEKA 230          
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Match: A0A0F2RAD7_9PROT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2RAD7_9PROT)

HSP 1 Score: 46.6 bits (109), Expect = 7.850e-5
Identity = 17/32 (53.12%), Postives = 25/32 (78.12%), Query Frame = 0
Query:    1 YYLENPLRYQFYRASCRRDSTVERRWGEDAYA 32
            YY++NP++Y++YRASC RD  V+  WG+ A A
Sbjct:  184 YYIKNPIKYRYYRASCGRDGRVKELWGDSAAA 215          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65901.17429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2G1Z1V1_9PROT7.960e-858.82Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2C9CQ59_9RHOB9.730e-773.33Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2E0IXN6_9GAMM2.270e-670.00Peptide methionine sulfoxide reductase MsrA n=3 Ta... [more]
MSRA2_RHIME5.050e-659.38Peptide methionine sulfoxide reductase MsrA 2 n=25... [more]
UPI0018F1F2905.220e-666.67peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
A0A2S6U5U8_9PROT5.710e-655.88Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A6M1Y708_9GAMM5.820e-666.67Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A423Q0F8_9GAMM2.260e-564.29Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
U2FNK8_9GAMM3.240e-563.33Peptide methionine sulfoxide reductase MsrA n=2 Ta... [more]
A0A0F2RAD7_9PROT7.850e-553.13Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65901contigEcto-sp13_S_contig65901:638..748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65901.17429.1mRNA_Ecto-sp13_S_contig65901.17429.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65901 638..748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65901.17429.1 ID=prot_Ecto-sp13_S_contig65901.17429.1|Name=mRNA_Ecto-sp13_S_contig65901.17429.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp
YYLENPLRYQFYRASCRRDSTVERRWGEDAYAGVNH*
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