prot_Ecto-sp13_S_contig6585.17417.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6585.17417.1
Unique Nameprot_Ecto-sp13_S_contig6585.17417.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length352
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6585.17417.1 vs. uniprot
Match: D7FVY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY4_ECTSI)

HSP 1 Score: 550 bits (1418), Expect = 2.720e-195
Identity = 319/352 (90.62%), Postives = 334/352 (94.89%), Query Frame = 0 
Query:    1 MPPSVGDASVKGVAGLSCDGTGTHAGKVASALLAKHVRTLEVLHSLQKSNAQLRQDIQDKSGEEEVQRRIAEAVATAVAAPNDLSEELQAQGEKLRGRVAGLEQELISAKQTAEKILDNANSQMESLRKINVTLQQKCKDLEFEAASHERQISQQGEVEAHLRETSVALALAEGRASDLARTLADQESTSNTLQLRLKENDDKICAMKEAETILTAEVDESKTQLARLNGQARDLQEKLRVAGAEQGQLGVRLEQALRDLANSREEKKELVKKEQESLARAAEQKSRVNAAEAKLSEERKRFQRFREDAKRKIEEEARRHKAAFMEHAYERDQLLVRIDALSREVESMRAHM 352
            MPPSVGD SVKGVAGLS  GT T+ GKVASALLAKHVRTLEVLHSLQKSNAQLRQDIQDKSGEEEVQRRIAEA+A AVAAPNDLSEELQAQGEKLR RVAGLEQELISAKQTAEK LDNANSQMESLRK+NVTLQ+KC+DLEFEAASHERQISQQGEVE+HLRETSVAL+LAEGRASDLAR LADQESTS+TLQLRLKENDDKI AMKEAETILTAEVDESKTQLARL+GQARDLQEKLRVA AE GQLGVRLEQALRDLA SREE KE+V+KEQESLA AAEQKSRVNAAEAKLSEERKRFQRFREDAKRK+EEEARR+KAA MEHAYER++LLVRIDAL RE ESMRAHM
Sbjct:    1 MPPSVGDTSVKGVAGLSYGGTATNVGKVASALLAKHVRTLEVLHSLQKSNAQLRQDIQDKSGEEEVQRRIAEAIAAAVAAPNDLSEELQAQGEKLRERVAGLEQELISAKQTAEKSLDNANSQMESLRKMNVTLQKKCEDLEFEAASHERQISQQGEVESHLRETSVALSLAEGRASDLARRLADQESTSSTLQLRLKENDDKIFAMKEAETILTAEVDESKTQLARLDGQARDLQEKLRVAEAEHGQLGVRLEQALRDLATSREENKEMVEKEQESLAGAAEQKSRVNAAEAKLSEERKRFQRFREDAKRKLEEEARRYKAALMEHAYERERLLVRIDALLREAESMRAHM 352
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6585.17417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVY4_ECTSI2.720e-19590.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 331..352
NoneNo IPR availableCOILSCoilCoilcoord: 218..245
NoneNo IPR availableCOILSCoilCoilcoord: 43..63
NoneNo IPR availableCOILSCoilCoilcoord: 253..315
NoneNo IPR availableCOILSCoilCoilcoord: 85..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6585contigEcto-sp13_S_contig6585:500..3798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6585.17417.1mRNA_Ecto-sp13_S_contig6585.17417.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6585 500..3798 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6585.17417.1 ID=prot_Ecto-sp13_S_contig6585.17417.1|Name=mRNA_Ecto-sp13_S_contig6585.17417.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=352bp
MPPSVGDASVKGVAGLSCDGTGTHAGKVASALLAKHVRTLEVLHSLQKSN
AQLRQDIQDKSGEEEVQRRIAEAVATAVAAPNDLSEELQAQGEKLRGRVA
GLEQELISAKQTAEKILDNANSQMESLRKINVTLQQKCKDLEFEAASHER
QISQQGEVEAHLRETSVALALAEGRASDLARTLADQESTSNTLQLRLKEN
DDKICAMKEAETILTAEVDESKTQLARLNGQARDLQEKLRVAGAEQGQLG
VRLEQALRDLANSREEKKELVKKEQESLARAAEQKSRVNAAEAKLSEERK
RFQRFREDAKRKIEEEARRHKAAFMEHAYERDQLLVRIDALSREVESMRA
HM
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