prot_Ecto-sp13_S_contig6549.17368.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6549.17368.1
Unique Nameprot_Ecto-sp13_S_contig6549.17368.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length598
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6549.17368.1 vs. uniprot
Match: D7FJD6_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJD6_ECTSI)

HSP 1 Score: 1028 bits (2659), Expect = 0.000e+0
Identity = 570/638 (89.34%), Postives = 583/638 (91.38%), Query Frame = 0 
Query:    1 VLIEAPHVVQTMEAILSSENYVYESQEMDNMTLLRARFQERYTITFSCMQENSIRSTMRAILGDKIESQRRS-------AGANFRLNVGQFRIDLTDGEVVFHSTQPLKGMTLGDCITLLHSWFKAFMATFAVYRHGIKALIEGRSLEAAEGVVDQTLSSIRGGSSSSPSE-----------------------APTAKITSSFVTQAMEDIFKGRDYVYEVMQSDSSVTTLKAKFTGGYTVRFMCKPGNNIRSTMLAVLDDKVGDERQRSVVATYFAQVNFNLNNGKFELDMRDGEVMYNCTLPLEGMTQSDCTHLLRSWFSVFMATFYVYMPGLKLIIGGGSIEDANAAKARLLEEEHDGGSSRPPAXXXXXXXXXXXXXXXXXXXXXXXXXX--------VQPSPAAENSVAAKAFKDLLLERGDCSSLESDVEGASHVVQGVYDYKGATAVIWACDKTDEKILEVRVFMVDAVPRHRVEPLSRLIEKVNTNSAVGGFKLDEENGRLYYGYSVPYGGLTDGQLTVLVRGKSLQLCLGTHLEFLSSIKAVIHDSAPVPSSVDMLRSAYHTTRDNPESDFHKNELVPTGRHEGPSAATMPGVNR--PRPPPPAYGFGTAPSSRDIKDAAGAMPRVPQ 598
            VLIEAPHVVQTMEAILS ENY+YESQEMDNMTLLRARFQERYTITFSCMQENS+RSTMRAIL DKIESQR+        A ANFRLNVGQFRIDLTDGEVVFHSTQPLKGMTLGDCI LLHSWFKAFMATFAVYRHG+KALIEGRSLEAAEGVVDQTLSSIRGGSSSSPSE                       APTAKITS+FVTQAMEDIFKGR+YVYEV+QSDSSVTTLKAKFTGGYTVRFMCKPGNNIRSTMLAVL+DKVGDERQRSVVATYFAQVNFNLNNGKFELDMRDGEVMYNCTLPLEGMTQSDCTHLLRSWFSVFMATFYVYMPGLKLIIGGGSIEDANAAKARLLEEE  GGSSR PAXXXXXXXXXXXXXXXXXXXXXXXXXX        V+PS AAENSVAAKAFKDLLLERGDC SLESDVEGASHVVQGVYDYKGATAVIWACDKTDEK+LEVRVFMVDAVPRHRVEPLSRLIEKVNTNSAVGGFKLDEENGRLYYGYSVPYGGLTDGQLTVLVRGKSLQLCLGTHLEFL SIKAVIHDSAPVP SVDM+RS YHTTRDNPESDFHKNELVP+ RHEGPSAATMPGVNR  PRPPPPAYGFGTAPSSRD+KDAAG MPRVPQ
Sbjct:    4 VLIEAPHVVQTMEAILSRENYIYESQEMDNMTLLRARFQERYTITFSCMQENSVRSTMRAILSDKIESQRQRSVAATYIAKANFRLNVGQFRIDLTDGEVVFHSTQPLKGMTLGDCIPLLHSWFKAFMATFAVYRHGMKALIEGRSLEAAEGVVDQTLSSIRGGSSSSPSEGKEEHALGRTRADLSFSQQTNPAAPTAKITSAFVTQAMEDIFKGREYVYEVIQSDSSVTTLKAKFTGGYTVRFMCKPGNNIRSTMLAVLEDKVGDERQRSVVATYFAQVNFNLNNGKFELDMRDGEVMYNCTLPLEGMTQSDCTHLLRSWFSVFMATFYVYMPGLKLIIGGGSIEDANAAKARLLEEERGGGSSRRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVRPSRAAENSVAAKAFKDLLLERGDCCSLESDVEGASHVVQGVYDYKGATAVIWACDKTDEKMLEVRVFMVDAVPRHRVEPLSRLIEKVNTNSAVGGFKLDEENGRLYYGYSVPYGGLTDGQLTVLVRGKSLQLCLGTHLEFLPSIKAVIHDSAPVPPSVDMIRSTYHTTRDNPESDFHKNELVPS-RHEGPSAATMPGVNRHRPRPPPPAYGFGTAPSSRDVKDAAGVMPRVPQ 640
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6549.17368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJD6_ECTSI0.000e+089.34Protein kinase domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6549contigEcto-sp13_S_contig6549:2..5501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6549.17368.1mRNA_Ecto-sp13_S_contig6549.17368.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6549 2..5501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6549.17368.1 ID=prot_Ecto-sp13_S_contig6549.17368.1|Name=mRNA_Ecto-sp13_S_contig6549.17368.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=598bp
VLIEAPHVVQTMEAILSSENYVYESQEMDNMTLLRARFQERYTITFSCMQ
ENSIRSTMRAILGDKIESQRRSAGANFRLNVGQFRIDLTDGEVVFHSTQP
LKGMTLGDCITLLHSWFKAFMATFAVYRHGIKALIEGRSLEAAEGVVDQT
LSSIRGGSSSSPSEAPTAKITSSFVTQAMEDIFKGRDYVYEVMQSDSSVT
TLKAKFTGGYTVRFMCKPGNNIRSTMLAVLDDKVGDERQRSVVATYFAQV
NFNLNNGKFELDMRDGEVMYNCTLPLEGMTQSDCTHLLRSWFSVFMATFY
VYMPGLKLIIGGGSIEDANAAKARLLEEEHDGGSSRPPAPEPEPVSSSSS
SSTTTTSAPVPQPPPVQPSPAAENSVAAKAFKDLLLERGDCSSLESDVEG
ASHVVQGVYDYKGATAVIWACDKTDEKILEVRVFMVDAVPRHRVEPLSRL
IEKVNTNSAVGGFKLDEENGRLYYGYSVPYGGLTDGQLTVLVRGKSLQLC
LGTHLEFLSSIKAVIHDSAPVPSSVDMLRSAYHTTRDNPESDFHKNELVP
TGRHEGPSAATMPGVNRPRPPPPAYGFGTAPSSRDIKDAAGAMPRVPQ
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