prot_Ecto-sp13_S_contig6509.17304.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6509.17304.1
Unique Nameprot_Ecto-sp13_S_contig6509.17304.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length162
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6509.17304.1 vs. uniprot
Match: D7FUA9_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUA9_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 4.780e-61
Identity = 121/163 (74.23%), Postives = 128/163 (78.53%), Query Frame = 0 
Query:    1 MAALFRAATWVLPLVLADAAAXXXXXXXXXXXXXXXLFEAETYHXXXXXXXPSPTSPREGGRTFSPTNGGGSGNGVASSHDKDEVSVRRRYNGQQKRSTGWFGWAPDARQHARKPRLSGDLPAGFIASPTAALGQQRRGARTCG-SSSGGHSPLRSFGGGTEA 162
            MAALFRAATWVLPLVLAD AA               LFEAET+H XXXXXX        GGRTFSP NGGG+GNG+ASS +K EVS+RRR NGQQ+RS+GW GWAPDARQHARKPRLSGDLPAGFIASP AALGQQRRG RTCG SSSGG SPLRSFGGG EA
Sbjct:    1 MAALFRAATWVLPLVLADVAAAAAAAPTGPSVETSRLFEAETHHRXXXXXXXXXXXXSGGGRTFSPANGGGNGNGIASSRNKHEVSIRRRSNGQQRRSSGWLGWAPDARQHARKPRLSGDLPAGFIASPAAALGQQRRGTRTCGGSSSGGDSPLRSFGGGREA 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6509.17304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUA9_ECTSI4.780e-6174.23CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.685

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6509contigEcto-sp13_S_contig6509:1564..2929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6509.17304.1mRNA_Ecto-sp13_S_contig6509.17304.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6509 1494..2929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6509.17304.1 ID=prot_Ecto-sp13_S_contig6509.17304.1|Name=mRNA_Ecto-sp13_S_contig6509.17304.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp
MAALFRAATWVLPLVLADAAAAAAAAPAGPSAETSRLFEAETYHRHHRRQ
RPSPTSPREGGRTFSPTNGGGSGNGVASSHDKDEVSVRRRYNGQQKRSTG
WFGWAPDARQHARKPRLSGDLPAGFIASPTAALGQQRRGARTCGSSSGGH
SPLRSFGGGTEA
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