prot_Ecto-sp13_S_contig6503.17297.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6503.17297.1
Unique Nameprot_Ecto-sp13_S_contig6503.17297.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length300
Homology
BLAST of mRNA_Ecto-sp13_S_contig6503.17297.1 vs. uniprot
Match: D8LT57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT57_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 8.610e-116
Identity = 227/304 (74.67%), Postives = 235/304 (77.30%), Query Frame = 0
Query:    1 MREEREVEAVAPVECEGEVTARSMSALLRRFSLGDDGASCTLERRRSSSDGLSLEGDQAGGGDPVVFERDFDGSSGGSSESDGVDRAGXXXXXXX--DTNRSAKRWGSG-NVVPKDVLKEVGGSGVTNEDNNGANNNIR--GAPSHRPVSSGGGGAPSNSYYPGMHVGAQVAATMVELPASDDPRAISXXXXXXXXXXXVVIVRQGHDNRDGSDTADRGWMAKEDEEEEEDRRGDLECVLDSIPGARLATTVAGTXXXATLTAALGVAGFTGGVMEAVVPAQAWAEGVHAFQSARFLGGWALGR 299
            M+EERE EA  PVECEG VTARSMSALLRRFSLG DGASCTLERR SSSDG SLEGDQAG                            XXXXXXX  DTNRSAKRWG G NVVPKDV KEVGGSGVTNED+NGAN N R  GAPSHRPV SG  GAPSN Y   +H+GAQ AA+MVELPASDDP A SXXXXXXXXXXX  IVR+ HD RDGSDTADRG M +E  EEEEDRRGDLECV+DSIPG RL  TVAGT   ATLTAALGVAGFT GVMEAVVPAQAWAEGVHAFQSARFLGGWALGR
Sbjct:    1 MQEEREGEATVPVECEGNVTARSMSALLRRFSLGGDGASCTLERRSSSSDGCSLEGDQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDTNRSAKRWGEGGNVVPKDVPKEVGGSGVTNEDDNGANKNSRRGGAPSHRPVLSG--GAPSNPYDSAVHLGAQAAASMVELPASDDPWATSXXXXXXXXXXXXXIVRKRHDKRDGSDTADRGRMGRE--EEEEDRRGDLECVVDSIPGVRLVATVAGTVAGATLTAALGVAGFTVGVMEAVVPAQAWAEGVHAFQSARFLGGWALGR 300          
BLAST of mRNA_Ecto-sp13_S_contig6503.17297.1 vs. uniprot
Match: A0A6H5KCF8_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCF8_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 1.300e-114
Identity = 220/300 (73.33%), Postives = 233/300 (77.67%), Query Frame = 0
Query:    3 EEREVEAVAPVECEGEVTARSMSALLRRFSLGDDGASCTLERRRSSSDGLSLEGDQAGGGDPVVFERDFDGSSGGSSESDGVDRAGXXXXXXXDTNRSAKRWGS-GNVVPKDVLKEVGGSGVTNEDNNGANNNIR--GAPSHRPVSSGGGGAPSNSYYPGMHVGAQVAATMVELPASDDPRAISXXXXXXXXXXXVVIVRQGHDNRDGSDTADRGWMAKEDEEEEEDRRGDLECVLDSIPGARLATTVAGTXXXATLTAALGVAGFTGGVMEAVVPAQAWAEGVHAFQSARFLGGWALGR 299
            +ERE EA  PVECEG+VTARSMSALLRRFSLG DG SCTLER+ SSSDG SL GDQAGG  PVVFERD DG  GGSSES GVDRA         TNRSAK WG  G VVPKDV +EVGGSGVTNED++G N N    GAPSHRPVS  GGGAPSNSY   +H+GA+ AA+M+ELPASDDPRA + XXXXXXXXX V+IVRQ HD RDGSDTADRG M KED    EDRRG LECVLD IP ARLA TVA  XXX         AGFT GVMEAVVPAQAWAEGVHAFQSARFLGGWALGR
Sbjct:  406 QEREGEAAVPVECEGDVTARSMSALLRRFSLGGDGDSCTLERQSSSSDGSSLGGDQAGGVGPVVFERDVDGGGGGSSESGGVDRA----DGGDGTNRSAKTWGKRGKVVPKDVPQEVGGSGVTNEDDDGTNKNSTRGGAPSHRPVS--GGGAPSNSYDSAVHLGARAAASMLELPASDDPRATASXXXXXXXXXHVIIVRQRHDKRDGSDTADRGRMGKEDXXXXEDRRGGLECVLDYIPSARLAATVAXXXXXXXXXXXXXXAGFTAGVMEAVVPAQAWAEGVHAFQSARFLGGWALGR 699          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6503.17297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT57_ECTSI8.610e-11674.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCF8_9PHAE1.300e-11473.33CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6503contigEcto-sp13_S_contig6503:229..1128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6503.17297.1mRNA_Ecto-sp13_S_contig6503.17297.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6503 16..1190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6503.17297.1 ID=prot_Ecto-sp13_S_contig6503.17297.1|Name=mRNA_Ecto-sp13_S_contig6503.17297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
MREEREVEAVAPVECEGEVTARSMSALLRRFSLGDDGASCTLERRRSSSD
GLSLEGDQAGGGDPVVFERDFDGSSGGSSESDGVDRAGGSGGGGGDTNRS
AKRWGSGNVVPKDVLKEVGGSGVTNEDNNGANNNIRGAPSHRPVSSGGGG
APSNSYYPGMHVGAQVAATMVELPASDDPRAISSSSSSSPSSSHVVIVRQ
GHDNRDGSDTADRGWMAKEDEEEEEDRRGDLECVLDSIPGARLATTVAGT
VAGATLTAALGVAGFTGGVMEAVVPAQAWAEGVHAFQSARFLGGWALGR*
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