prot_Ecto-sp13_S_contig6501.17292.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig6501.17292.1
Unique Name	prot_Ecto-sp13_S_contig6501.17292.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	404

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 2.090e-137
Identity = 357/403 (88.59%), Postives = 357/403 (88.59%), Query Frame = 0

Query:    1 MSNRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            MSNRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALAEL DSEKTEKLFSAF                         REQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTRE                   VYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR
Sbjct:    1 MSNRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELSDSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTRE-------------------VYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 384

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: A0A7S3XNW0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNW0_HETAK)

HSP 1 Score: 285 bits (730), Expect = 4.200e-87
Identity = 300/402 (74.63%), Postives = 338/402 (84.08%), Query Frame = 0

Query:    3 NRNVQAKNRAPASIQITAEQILREAKDRQLDVE-VKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            N+ +Q KNRAPA IQITAEQILRE+K+R +D + +KAPRQ ITD EEL  +RMRKRKEFED+IR+QR+H+G W KY+ WEESQ E+ERARS+YER+L+VD+++ +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWM WEP+DNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AL EL + E+ EKL++A XXXXXXXXXXXXXXXXXX       RE+VPELY+ F+ FEK+HG+ +GIEEVI+N RRLQYEE  SASPLDYD WFDY+RLEE+ G L++ RE                   VYERAIA VPP  EKRFWRRYIYLWINYALFEELQA+D  R R
Sbjct:    6 NKAIQPKNRAPAPIQITAEQILRESKERSVDGQNIKAPRQNITDLEELTQYRMRKRKEFEDSIRRQRQHLGTWHKYAKWEESQKEYERARSIYERALDVDFKSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMRWEPDDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALRELEEGERGEKLYAAXXXXXXXXXXXXXXXXXXXFALDQMRREEVPELYQAFLSFEKQHGNREGIEEVIINKRRLQYEEAVSASPLDYDAWFDYVRLEEAEGTLEQARE-------------------VYERAIAQVPPRAEKRFWRRYIYLWINYALFEELQAQDQDRAR 388

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: A0A835ZA95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA95_9STRA)

HSP 1 Score: 266 bits (680), Expect = 4.240e-79
Identity = 263/401 (65.59%), Postives = 294/401 (73.32%), Query Frame = 0

Query:    3 NRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            +RN+Q KNRAPA IQI+AEQILREA+DRQ+DVEVKAPRQQITD EEL VFRMRKRKE+ED+IR QR+HIG W+KY+ WEESQ EF RA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWM+WEP+DNA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AL+EL +  +TEKL+ +F                         R+ VP+LYR+F GFEKR G+  GIE+ ++  RRLQYEE  +A P  YD WFDY RLEESTGD +R RE                   VYERA+A VPPV +KRFWRRY++LWINYALFEEL A+D  R R
Sbjct:    2 SRNIQVKNRAPAPIQISAEQILREARDRQIDVEVKAPRQQITDAEELTVFRMRKRKEYEDSIRMQRQHIGTWIKYAAWEESQAEFARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMDWEPDDNAWGAYIKFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALSELDEESRTEKLYISFAQFEERCKEYDRARVIYKYALDQMPRDLVPDLYREFAGFEKRRGTPSGIEDAVVGRRRLQYEEEVAADPHAYDTWFDYARLEESTGDGNRVRE-------------------VYERAVACVPPVAQKRFWRRYVWLWINYALFEELAADDQARAR 383

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: D8RS61_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RS61_SELML)

HSP 1 Score: 247 bits (631), Expect = 1.030e-71
Identity = 259/400 (64.75%), Postives = 305/400 (76.25%), Query Frame = 0

Query:    4 RNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            R  + KN+ PA +QITAEQILRE ++RQ + E++ P+Q+ITD++EL  +R+RKRKE+ED IR+ R +IG W+KY+ WEESQ +F RARSV+ER++ VDY NQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWM WEP+ +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ EL +  +TE+LF AF                         + Q  ELY+ F+ FEK+HG+ +GIE+VI++ RR QYE+    +PL+YD WFDY+RLEES GD DR RE                   VYERAIANVPP  EKR+W+RYIYLWINYAL+EEL+AED  RTR
Sbjct:   23 RPTRVKNKTPAPVQITAEQILRETRERQ-EPEIRPPKQKITDKQELDEYRLRKRKEYEDLIRRVRWNIGVWVKYAQWEESQKDFNRARSVWERAITVDYTNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMLWEPDHHGWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVELGEDGQTEELFVAFANFEERCKEFERARAIYKYALDNIPKSQAEELYKKFVAFEKQHGNREGIEDVIVSKRRFQYEDEVKKNPLNYDFWFDYIRLEESVGDKDRIRE-------------------VYERAIANVPPAEEKRYWQRYIYLWINYALYEELEAEDMDRTR 402

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: A0A0D6RAS4_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6RAS4_ARACU)

HSP 1 Score: 243 bits (620), Expect = 4.080e-70
Identity = 274/400 (68.50%), Postives = 317/400 (79.25%), Query Frame = 0

Query:    4 RNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            R  + KN+ PA IQITAEQILREA++RQ + E++ P+Q+ITDE EL  +R+RKRKEFED IR+ R +   W+KY+ WEESQ +F RARSV+ER+LEVDYRN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWM WEP+ +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ +L +  +TE+LF AF  XXXXXXXXXXXXXXX        + Q  +LYR F+ FEK++G  +GIE+VI+  RR QYEE    +PL+YD WFDY+RLEES G+ DR RE                   +YERAIANVPP  EKR+W+RYIYLWINYAL+EEL+AED +RTR
Sbjct:   24 RPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDESELADYRLRKRKEFEDVIRRARWNSSVWVKYAQWEESQKDFARARSVWERALEVDYRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMAWEPDHHGWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEQLEEDGQTEELFVAFAEXXXXXXXXXXXXXXXKYALDHIPKGQAEDLYRKFVMFEKQYGDREGIEDVIVGKRRFQYEEEVKKNPLNYDAWFDYIRLEESVGNKDRIRE-------------------IYERAIANVPPAEEKRYWQRYIYLWINYALYEELEAEDMERTR 403

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: A0A067GMA5_CITSI (Uncharacterized protein n=4 Tax=rosids TaxID=71275 RepID=A0A067GMA5_CITSI)

HSP 1 Score: 234 bits (597), Expect = 1.110e-69
Identity = 275/400 (68.75%), Postives = 318/400 (79.50%), Query Frame = 0

Query:    4 RNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            R  + KN+ PA IQITAEQILREA++RQ + E++ P+Q+ITD  EL  +R+RKRKEFED IR+ R + G W+KY+ WEESQ +F RARSV+ER+LEVDYRN TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWM W P+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ +L D E+ E+LF A XXXXXXXXXXXXXXXXXXX      + +  +LYR F+ FEK++G  +GIE+ I+  RR QYE+    +P++YD WFDY+RLEES G+ +R RE                   VYERAIANVPP  EKR+W+RYIYLWINYAL+EEL A D +RTR
Sbjct:   25 RPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNTGVWIKYAKWEESQKDFNRARSVWERALEVDYRNHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMHWMPDQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEKLADDEEAEQLFVAXXXXXXXXXXXXXXXXXXXXALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPMNYDIWFDYIRLEESVGNKERARE-------------------VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTR 404

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: A0A2C9WBH9_MANES (Uncharacterized protein n=11 Tax=rosids TaxID=71275 RepID=A0A2C9WBH9_MANES)

HSP 1 Score: 241 bits (614), Expect = 2.480e-69
Identity = 276/400 (69.00%), Postives = 319/400 (79.75%), Query Frame = 0

Query:    4 RNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            R  + KN+ PA IQITAEQILREA++RQ + E++ P+Q+ITD  EL  +R+RKRKEFED IR+ R +I  W+KY+ WEESQ +F RARSV+ER+LEVDYRN TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWM W P+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ +L D E+ E+LF AFXXXXXXXXXXXXXXXXX        + +  +LYR F+ FEK++G  +GIE+ I+  RR QYE+    +PL+YD+WFDY+RLEES G+ +R RE                   VYERAIANVPP  EKR+W+RYIYLWINYAL+EEL AED +RTR
Sbjct:   25 RPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEVDYRNHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMGWMPDQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEKLADDEEAEQLFVAFXXXXXXXXXXXXXXXXXKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERIRE-------------------VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAEDIERTR 404

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: A0A0A0LSI4_CUCSA (Uncharacterized protein n=5 Tax=rosids TaxID=71275 RepID=A0A0A0LSI4_CUCSA)

HSP 1 Score: 236 bits (603), Expect = 3.370e-69
Identity = 276/400 (69.00%), Postives = 320/400 (80.00%), Query Frame = 0

Query:    4 RNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            R  + KN+ PA IQITAEQILREA++RQ + E++ P+Q+ITD  EL  +R+RKRKEFED IR+ R +I  W+KY+ WEESQ +F RARSV+ER+LEVDYRN TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERWM W P+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ +L D E+ E+LF A XXXXXXXXXXXXXXXXXXXX     + +  ++YR F+ FEK++G  +GIE+ I+  RR QYEE    +PL+YD+WFDY+RLEE+ G+ +R RE                   VYERAIANVPP  EKR+W+RYIYLWINYAL+EEL A DA+RTR
Sbjct:   25 RPTRVKNKTPAPIQITAEQILREARERQ-EAEIRPPKQKITDPTELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEVDYRNHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFERWMGWMPDQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVEKLADDEEAEQLFVAXXXXXXXXXXXXXXXXXXXXXLDHIPKGRAEDIYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEEEVRKNPLNYDSWFDYIRLEETAGNKERIRE-------------------VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAADAERTR 404

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BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: UPI0010AB1789 (LOW QUALITY PROTEIN: protein crooked neck-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010AB1789)

HSP 1 Score: 233 bits (595), Expect = 4.110e-69
Identity = 275/400 (68.75%), Postives = 317/400 (79.25%), Query Frame = 0

Query:    4 RNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            R  + KN+ PA +QITAEQILREA++RQ + E++ P+Q+ITD  EL  +R+RKRKEFED IR+ R ++  W+KY+ WEESQ +F+RARSV+ER+LEVDYRN TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RWM W P+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+  L D E+ E+LF A XXXXXXXXXXXXXXXXXX       + +  +LY+ F+GFEK++G  QGIE+ I+  RR QYE+     P +YD WFDY+RLEES G+ DR RE                   VYERAIANVPP  EKR+W+RYIYLWINYAL+EEL AED +RTR
Sbjct:   25 RPTRVKNKTPAPVQITAEQILREARERQ-EAEIRPPKQKITDPTELADYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFKRARSVWERALEVDYRNHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWMNWMPDQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEILADDEEAEQLFVAXXXXXXXXXXXXXXXXXXXFALDHIPKGRADDLYKKFVGFEKQYGDRQGIEDAIVGKRRFQYEDEVRKXPRNYDAWFDYIRLEESAGNKDRIRE-------------------VYERAIANVPPAPEKRYWQRYIYLWINYALYEELDAEDMERTR 404

[Close]

BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Match: A0A4D9CYM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM6_9STRA)

HSP 1 Score: 239 bits (611), Expect = 4.690e-69
Identity = 202/409 (49.39%), Postives = 234/409 (57.21%), Query Frame = 0

Query:    3 NRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELRVFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAELPDSEKTEKLFSAFXXXXXXXXXXXXXXXXXXXXXXXXXREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGGGEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTR 403
            +R V  KNRAPA+IQITAEQILREA DR +  E KAPR  ITD EELR +R+ KRKEFED IR+QR  +G ++KY+ WEESQ EFERARSVYER L+VDYRN T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       ++ +WE  +                                                          AL ELP++EK E+L+ AF                         RE++PELY+ F+ FEK+HG    IE+V+++ RR QYEE  SA PLDYD WFDY RLEE  G+L   RE                   VYERAIAN+PPV EKRFWRRYIYLWINYALFEELQA + +R R
Sbjct:    2 SRKVLVKNRAPAAIQITAEQILREANDRVVQ-EDKAPRVHITDPEELREYRVMKRKEFEDQIRRQRMFLGTYMKYAAWEESQHEFERARSVYERCLDVDYRNTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEMLGNITAGAYVVCHPTMRAFLKYAKWEERNQFQPALARVVYER---------------------------------------------ALQELPEAEKGERLYVAFARFEERQKEYERSRVIYKYALDNLPREKIPELYQQFVAFEKKHGDRAAIEDVVVSKRRGQYEEALSADPLDYDVWFDYARLEEGQGELSAVRE-------------------VYERAIANLPPVPEKRFWRRYIYLWINYALFEELQAGEVERAR 345

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6501.17292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LLC4_ECTSI	2.090e-137	88.59	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S3XNW0_HETAK	4.200e-87	74.63	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A835ZA95_9STRA	4.240e-79	65.59	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8RS61_SELML	1.030e-71	64.75	Uncharacterized protein n=1 Tax=Selaginella moelle...	[more]
A0A0D6RAS4_ARACU	4.080e-70	68.50	Uncharacterized protein n=2 Tax=Araucariaceae TaxI...	[more]
A0A067GMA5_CITSI	1.110e-69	68.75	Uncharacterized protein n=4 Tax=rosids TaxID=71275...	[more]
A0A2C9WBH9_MANES	2.480e-69	69.00	Uncharacterized protein n=11 Tax=rosids TaxID=7127...	[more]
A0A0A0LSI4_CUCSA	3.370e-69	69.00	Uncharacterized protein n=5 Tax=rosids TaxID=71275...	[more]
UPI0010AB1789	4.110e-69	68.75	LOW QUALITY PROTEIN: protein crooked neck-like n=1...	[more]
A0A4D9CYM6_9STRA	4.690e-69	49.39	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 396..403
None	No IPR available	PANTHER	PTHR11246	PRE-MRNA SPLICING FACTOR	coord: 9..403
None	No IPR available	PANTHER	PTHR11246:SF3	CROOKED NECK-LIKE PROTEIN 1	coord: 9..403
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 256..290 e-value: 3.7E-4 score: 29.8 coord: 300..332 e-value: 860.0 score: 1.2 coord: 51..83 e-value: 61.0 score: 9.6 coord: 353..387 e-value: 0.0051 score: 26.0 coord: 119..151 e-value: 0.0011 score: 28.2 coord: 85..117 e-value: 6.0E-6 score: 35.8 coord: 219..254 e-value: 0.0066 score: 25.7 coord: 153..184 e-value: 3.4E-5 score: 33.3 coord: 186..217 e-value: 0.034 score: 23.3
IPR003107	HAT (Half-A-TPR) repeat	PFAM	PF02184	HAT	coord: 86..115 e-value: 1.5E-6 score: 28.0 coord: 189..216 e-value: 2.9E-5 score: 23.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 304..403 e-value: 2.2E-8 score: 35.6 coord: 65..303 e-value: 3.5E-55 score: 189.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 275..396
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 142..300
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 61..171
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 205..275 score: 7.778
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 71..172 score: 10.743

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6501	contig	Ecto-sp13_S_contig6501:2241..7757 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6501.17292.1	mRNA_Ecto-sp13_S_contig6501.17292.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig6501 2241..7757 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig6501.17292.1 ID=prot_Ecto-sp13_S_contig6501.17292.1|Name=mRNA_Ecto-sp13_S_contig6501.17292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
MSNRNVQAKNRAPASIQITAEQILREAKDRQLDVEVKAPRQQITDEEELR
VFRMRKRKEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEV
DYRNQTIWLRYAEFEMRCKFPNHARNVWDRAVALLPRVDQFWYKYSYMEE
MLGNPAKARAIFERWMEWEPEDNAWSAYVKFEMRQEEPAKARSVFQRYVE
AHPHSRAFLKWARWEDKQSQYALARGVYERALAELPDSEKTEKLFSAFAH
FEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEV
IMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREARMEYLEGG
GEQDLATEPRVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQ
RTR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003107	HAT
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom