prot_Ecto-sp13_S_contig6499.17288.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6499.17288.1
Unique Nameprot_Ecto-sp13_S_contig6499.17288.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6499.17288.1 vs. uniprot
Match: A0A6H5KFI7_9PHAE (Aldose 1-epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI7_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 4.140e-19
Identity = 43/49 (87.76%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:    1 MPVLGTPFDFTEGASLGAAIDGVEGNPRGVDNCLVRVGTSDDGRAAVRS 49
            MPVLGTPFDFT+GASLGAAIDGV GNP GVDNCLVRVGTSD GRAA  S
Sbjct:  241 MPVLGTPFDFTQGASLGAAIDGVGGNPPGVDNCLVRVGTSDGGRAAATS 289
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BLAST of mRNA_Ecto-sp13_S_contig6499.17288.1 vs. uniprot
Match: D7FXP5_ECTSI (Aldose 1-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP5_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.040e-18
Identity = 42/46 (91.30%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:    1 MPVLGTPFDFTEGASLGAAIDGVEGNPRGVDNCLVRVGTSDDGRAA 46
            MPVLGTPFDFTEGASLGAAIDGV GNP GVDNCLVRVGTSD G+AA
Sbjct:  290 MPVLGTPFDFTEGASLGAAIDGVGGNPPGVDNCLVRVGTSDGGQAA 335
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6499.17288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFI7_9PHAE4.140e-1987.76Aldose 1-epimerase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D7FXP5_ECTSI1.040e-1891.30Aldose 1-epimerase n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6499contigEcto-sp13_S_contig6499:7872..8039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6499.17288.1mRNA_Ecto-sp13_S_contig6499.17288.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6499 7872..8057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6499.17288.1 ID=prot_Ecto-sp13_S_contig6499.17288.1|Name=mRNA_Ecto-sp13_S_contig6499.17288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
MPVLGTPFDFTEGASLGAAIDGVEGNPRGVDNCLVRVGTSDDGRAAVRSA
CCLSGR
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