prot_Ecto-sp13_S_contig6490.17275.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6490.17275.1
Unique Nameprot_Ecto-sp13_S_contig6490.17275.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length507
Homology
BLAST of mRNA_Ecto-sp13_S_contig6490.17275.1 vs. uniprot
Match: D8LLY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY1_ECTSI)

HSP 1 Score: 619 bits (1596), Expect = 3.210e-217
Identity = 403/531 (75.89%), Postives = 413/531 (77.78%), Query Frame = 0
Query:    1 AGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAAVGNGETKTPEGKPSPVMLQLLAACRAAPRDKENVFPIRAAAXXXXXXXXXXXXXXXX------------------------STTWKGVGVEADGVPPRVTLRKRRGDHGGTNGTSVSGMGNGGGGEDANEPASSVSSEAISSATAGGEREGDRQSRERENDGDAEESQFCGLLLREQPTSANDKVPGEDIEGGQGRGEHHFDGRMDESSYDFSENVESFRGAGEDPIVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTNENTALVEQAGVYDRSYEGEEEDGSRREERDRFSRHAGANDNPYDGXXXXXXXXXXXXXXXXXXXXXXX--GGGVEKEPRSSVDGGGASGVGEWNEDYYEDXXXXXXXXXXXXXXXXXXXXXXXXSAADVAAKVAANAGDEEVEEEALLAEGDGTHQDGLFDAEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 505
            AGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGA VG GE KTPEGK SPVMLQLLAACRAAPRDKEN FP+ AAA                                        STTW+GVGVE DGVPPRVTLRKRRGDHGGTNGTSV GMGNG GGEDANEPASSVSSE ISSATAG  REGDRQSRERE+DGDAEES+F GLLLR+QPT+A+DK  GED  GGQGR EHHFDGRMDE SYDFSENVES RG GEDPIVAA         XXX    XXXXXXXXX     VT ENTA+VEQAGVYDRSYEGEE+DG RREE DRFSRHAGAND+PY G                         G GVEKEPRSSVDGG ASGV EWNEDYYED  XXXXXXXXXXXXXXXXXXXXX SAADVAAKVAANAGD EVEEEALL  GDGTHQDGLFD EGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI
Sbjct:    3 AGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKTSPVMLQLLAACRAAPRDKENEFPLGAAATATATAGDRSERLIGEHKGWEGEEGRQEAEEEEGEDGGRRSTTWRGVGVEGDGVPPRVTLRKRRGDHGGTNGTSVCGMGNGSGGEDANEPASSVSSEPISSATAG-VREGDRQSRERESDGDAEESRFGGLLLRKQPTAADDKDGGEDNGGGQGRWEHHFDGRMDEDSYDFSENVESVRGGGEDPIVAAAASGVDGDGXXXESISXXXXXXXXX-----VTTENTAIVEQAGVYDRSYEGEEDDGHRREEGDRFSRHAGANDSPYGGGGGGDGALRNGNGDSLAGFGGSSDNGVGVEKEPRSSVDGGVASGVDEWNEDYYEDDDXXXXXXXXXXXXXXXXXXXXXNSAADVAAKVAANAGDGEVEEEALLTGGDGTHQDGLFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 527          
BLAST of mRNA_Ecto-sp13_S_contig6490.17275.1 vs. uniprot
Match: A0A6H5JFJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ8_9PHAE)

HSP 1 Score: 599 bits (1545), Expect = 8.240e-209
Identity = 394/521 (75.62%), Postives = 413/521 (79.27%), Query Frame = 0
Query:    2 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAAVGNGETKTPEGKPSPVMLQLLAACRAAPRDKENVFPIRAAAXXXXXXXXXXXXXXXXS-----------------TTWKGVGVEADGVPPRVTLRKRRGDHGGTNGTSVSGMGNGGGGEDANEPASSVSSEAISSATAGGEREGDRQSRERENDGDAEESQFCGLLLREQPTSANDKVPGEDIEGGQGRGEHHFDGRMDESSYDFSENVESFRGAGEDPIVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTNENTALVEQAGVYDRSYEGEEEDGSRREERDRFSRHAGANDNPYDGXXXXXXXXXXXXXXXXXXXXXXXGGGVEKEPRSSVDGGGASGVGEWNEDYYEDXXXXXXXXXXXXXXXXXXXXXXXXSAADVAAKVAANAGDEEVEEEALLAEGDGTHQDGLFDAEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 505
            GRL+LQVVADFLEHWELHQTLSVLKLETDMATED LSTEELGSIVANGAAVG GETKTP+GKPSPVMLQLLAACRAAPRD+EN  P+ AAA                                  TTW+GVGVE DGVPPRVTLRKRRGDHGGT+GTSVSGMGNG GGEDANEPA SV SE +SSATAG EREGDRQSRERENDGDAEES+F GLLLREQPT+A+D   GED  GGQ R EHHFDGRMDESSYDFSENVES +GAGEDP+VAAXXXXXXXXXXXXXXXXXXXXXXXXXXX   VT+EN ALVEQAGVYDRS EG+E+DG RREE DRFS+HAGAN++    XXXX                   GGGVEKEPRSSVDGG ASGV EWNEDYYED     XXXXX X            SAADVAAKVAANAGD EVE+EALLAEG GTHQDG FD EGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI
Sbjct:   61 GRLALQVVADFLEHWELHQTLSVLKLETDMATEDFLSTEELGSIVANGAAVGKGETKTPDGKPSPVMLQLLAACRAAPRDRENGLPLGAAAADRSERLIGEDKGRKEEEGRQEAEEGEEDGGRRGTTWRGVGVEGDGVPPRVTLRKRRGDHGGTSGTSVSGMGNGSGGEDANEPAWSVPSEPVSSATAG-EREGDRQSRERENDGDAEESRFGGLLLREQPTAADDIYRGEDKSGGQDRWEHHFDGRMDESSYDFSENVESVKGAGEDPMVAAXXXXXXXXXXXXXXXXXXXXXXXXXXX---VTSENAALVEQAGVYDRSCEGKEDDGPRREEGDRFSKHAGANNSYGXXXXXXVLRNGNGDSLAGFGGSSDNGGGVEKEPRSSVDGGVASGVDEWNEDYYEDDDFDGXXXXXIXNDDGDI------SAADVAAKVAANAGDGEVEDEALLAEGGGTHQDGFFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 571          
BLAST of mRNA_Ecto-sp13_S_contig6490.17275.1 vs. uniprot
Match: D7FK22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK22_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 5.680e-33
Identity = 66/70 (94.29%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 AGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAAVGNGETKTPEGKPSPVMLQ 70
            AGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGA VG GE KTPEGK SPVMLQ
Sbjct:    3 AGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKTSPVMLQ 72          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6490.17275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLY1_ECTSI3.210e-21775.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFJ8_9PHAE8.240e-20975.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK22_ECTSI5.680e-3394.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6490contigEcto-sp13_S_contig6490:540..3658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6490.17275.1mRNA_Ecto-sp13_S_contig6490.17275.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6490 540..3658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6490.17275.1 ID=prot_Ecto-sp13_S_contig6490.17275.1|Name=mRNA_Ecto-sp13_S_contig6490.17275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=507bp
AGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGA
AVGNGETKTPEGKPSPVMLQLLAACRAAPRDKENVFPIRAAAADRKEEEE
EEEDGGRRSTTWKGVGVEADGVPPRVTLRKRRGDHGGTNGTSVSGMGNGG
GGEDANEPASSVSSEAISSATAGGEREGDRQSRERENDGDAEESQFCGLL
LREQPTSANDKVPGEDIEGGQGRGEHHFDGRMDESSYDFSENVESFRGAG
EDPIVAAAASGVDGGGGDGESISAAASAAAAGAAGGGVTNENTALVEQAG
VYDRSYEGEEEDGSRREERDRFSRHAGANDNPYDGGGGGALRNENGDSLA
GFGGSSDNGGGVEKEPRSSVDGGGASGVGEWNEDYYEDDDFDGDDEEDID
NDDDDAGSTGDNSAADVAAKVAANAGDEEVEEEALLAEGDGTHQDGLFDA
EGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIV
DAQSIQ*
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