prot_Ecto-sp13_S_contig6489.17274.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6489.17274.1
Unique Nameprot_Ecto-sp13_S_contig6489.17274.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp13_S_contig6489.17274.1 vs. uniprot
Match: A0A6H5KQB0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB0_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 4.380e-61
Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 0
Query:   53 QVQTGLQTLELPSKADHVEGLFTVFDKNRDGVIHFAEFEELALHRRHAAHLPRTDGKHAFSILLADVFENLDHTADGFIRKEDIRRALDKLDIVASDAQIT 153
            QVQTGLQTLELPSKADHVEGLFTVFDKNRDGVIHFAEFEELALHRRHAAH PRTDG+HAFS LLADVFENLDHTADGFIR+EDIRRALDKLDIVASDAQIT
Sbjct:   20 QVQTGLQTLELPSKADHVEGLFTVFDKNRDGVIHFAEFEELALHRRHAAHFPRTDGEHAFSTLLADVFENLDHTADGFIREEDIRRALDKLDIVASDAQIT 120          
BLAST of mRNA_Ecto-sp13_S_contig6489.17274.1 vs. uniprot
Match: D8LH95_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH95_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 5.370e-59
Identity = 117/153 (76.47%), Postives = 119/153 (77.78%), Query Frame = 0
Query:    1 MVLKRTLSIAKAPDLDEEEXXXELERFKASPEVVREVFSHLDRHEVGYVNREQVQTGLQTLELPSKADHVEGLFTVFDKNRDGVIHFAEFEELALHRRHAAHLPRTDGKHAFSILLADVFENLDHTADGFIRKEDIRRALDKLDIVASDAQIT 153
            MVLKRTLSIAKAPDLDEE XXXELERFK                         VQTGLQTLELPSKADHVEGLFTVFDKNRDG+IHFAEFEELALHRRHAAH  RTDG+      LADVFENLDHTADGFIRKEDIRRALDKLDIVASDAQIT
Sbjct:    1 MVLKRTLSIAKAPDLDEEXXXXELERFK-------------------------VQTGLQTLELPSKADHVEGLFTVFDKNRDGIIHFAEFEELALHRRHAAHFLRTDGE--LLAQLADVFENLDHTADGFIRKEDIRRALDKLDIVASDAQIT 126          
BLAST of mRNA_Ecto-sp13_S_contig6489.17274.1 vs. uniprot
Match: A0A8H7UKW8_MORIS (Uncharacterized protein (Fragment) n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UKW8_MORIS)

HSP 1 Score: 54.7 bits (130), Expect = 8.860e-6
Identity = 37/123 (30.08%), Postives = 65/123 (52.85%), Query Frame = 0
Query:   34 VREVFSHLDRHEVGYVNREQVQTGLQTL--ELPSKA--DHVEGLFTVFDKNRDGVIHFAEFEELALHRRHAAHLPRTDGKHAFSILLADVFENLDHTADGFIRKEDIRRALDKLDIVASDAQI 152
            ++ +FS L   E GY++ E V  G+QTL  +LP++   D V+ L    D ++DG++ FAEFE   + +                  L  +FE +D + D  +++E+++ AL +  I ASD ++
Sbjct:   68 LKSLFSALANPETGYIDTESVLKGIQTLTYQLPAQKRDDIVKKLVEKCDTSKDGLVDFAEFETYVVEKEEE---------------LWHLFEQIDKSGDQMLQREEVKSALRRGGIAASDKEV 175          
BLAST of mRNA_Ecto-sp13_S_contig6489.17274.1 vs. uniprot
Match: A0A835Z3Z5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 9.430e-6
Identity = 49/165 (29.70%), Postives = 72/165 (43.64%), Query Frame = 0
Query:    6 TLSIAKAPDLDEEEXXXELERFKASPEVVREVFSHLDRHEVGYVNREQVQTGLQTLELPSKADHVEGLF------------------TVFDKNRDGVIHFAEFEELALHRRHAAHLPRTDGKHAFSILLADVFENLDHTADGFIRKEDIRRALDKLDIVASDAQI 152
            TL + +    D +    ELE FK     VR VF  LD+   G V RE+++  L+ +ELP+  +H+                      T+  +   G   +A++   AL R  A               L   F +LD   DG I ++DIRRAL +LD+ ASD +I
Sbjct:  256 TLRLDQGDAGDSKANEAELESFKVR---VRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQY---ALSRHQA---------------LTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEI 399          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6489.17274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KQB0_9PHAE4.380e-6196.04EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LH95_ECTSI5.370e-5976.47N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A8H7UKW8_MORIS8.860e-630.08Uncharacterized protein (Fragment) n=1 Tax=Mortier... [more]
A0A835Z3Z5_9STRA9.430e-629.70Mitochondrial carrier domain-containing protein n=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 33..61
e-value: 35.0
score: 5.3
coord: 69..97
e-value: 1.4
score: 16.6
coord: 115..143
e-value: 17.0
score: 7.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 32..93
e-value: 1.9E-9
score: 37.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 116..146
score: 6.954
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 29..64
score: 8.349
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 65..100
score: 10.692
NoneNo IPR availableGENE3D1.10.238.10coord: 10..153
e-value: 7.5E-20
score: 73.1
NoneNo IPR availablePANTHERPTHR10891:SF745coord: 15..93
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 15..93
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 32..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6489contigEcto-sp13_S_contig6489:213..3221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6489.17274.1mRNA_Ecto-sp13_S_contig6489.17274.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6489 213..3221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6489.17274.1 ID=prot_Ecto-sp13_S_contig6489.17274.1|Name=mRNA_Ecto-sp13_S_contig6489.17274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
MVLKRTLSIAKAPDLDEEEEEEELERFKASPEVVREVFSHLDRHEVGYVN
REQVQTGLQTLELPSKADHVEGLFTVFDKNRDGVIHFAEFEELALHRRHA
AHLPRTDGKHAFSILLADVFENLDHTADGFIRKEDIRRALDKLDIVASDA
QIT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR039647EF_hand_pair_protein_CML-like
IPR011992EF-hand-dom_pair