prot_Ecto-sp13_S_contig6485.17270.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6485.17270.1
Unique Nameprot_Ecto-sp13_S_contig6485.17270.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length478
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6485.17270.1 vs. uniprot
Match: D8LNN6_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN6_ECTSI)

HSP 1 Score: 517 bits (1331), Expect = 1.940e-178
Identity = 435/464 (93.75%), Postives = 439/464 (94.61%), Query Frame = 0 
Query:    1 MDSGDLLGVAILTKSEDDVRRMIGKPGFRRHSLNQVLRSGGHTPLALATSAGRLGMVKLLIEAGADPLAYCDGDNCIHVAARYGHPKIVSELIRRGISVEVSTLDQRRPLFIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQESHMEAAVLLTNYRPSAVRRPPDSLHLCVLRNDMGGARDLLDRGAPPDHADRDGVTPLQSAVLIASPRMVEVMLRGGADESAALPAARAGGKAGVTPLALSSARLSGRRQECADARVARARVRVRDALLRVGAVRAGCWRWPELLEVRPAASGEGAATRSAFSSAGRAVQGKNGVGSGDGLGASSGRGRIPGVGLLRLGNRDRSTRAALMTTTALNR 464
            MDSGDLLGVAILTKSEDDVRRMIGKPGFRRHSLNQVLRSG HTPL LATSAGRLGMVKLLI+AGADPLAYCDGDNCIHVAARYGHPKIVSELIRRG+SVEVSTLDQRRPLFIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     MEAAVLLT YRPS VRRPPDSLHLCVLRND G ARDLL RGAPPDHADRDGVTPLQSAVLIASPRMVEVMLRGGADESAALPAARAGGKAGVTPLALSSARLSGRRQECADARVARARVRVRDALLRVGAVRAGCWRWPELLEV P ASGE  AT SA SSAGRAVQGK GVGSGDGLGAS GRGR+PG GL+RLGNRDRS R ALMT  ALNR
Sbjct:    1 MDSGDLLGVAILTKSEDDVRRMIGKPGFRRHSLNQVLRSGDHTPLGLATSAGRLGMVKLLIDAGADPLAYCDGDNCIHVAARYGHPKIVSELIRRGVSVEVSTLDQRRPLFIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEAAVLLTTYRPSPVRRPPDSLHLCVLRNDFGAARDLLSRGAPPDHADRDGVTPLQSAVLIASPRMVEVMLRGGADESAALPAARAGGKAGVTPLALSSARLSGRRQECADARVARARVRVRDALLRVGAVRAGCWRWPELLEVLPVASGEEVATGSALSSAGRAVQGKKGVGSGDGLGASLGRGRVPGAGLVRLGNRDRSKRVALMTKAALNR 464
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6485.17270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNN6_ECTSI1.940e-17893.75Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 138..167
e-value: 470.0
score: 7.5
coord: 72..101
e-value: 1.1E-4
score: 31.6
coord: 171..200
e-value: 1.5
score: 17.8
coord: 204..233
e-value: 3.4E-5
score: 33.3
coord: 300..329
e-value: 35.0
score: 13.3
coord: 267..296
e-value: 4400.0
score: 0.2
coord: 105..134
e-value: 0.83
score: 18.7
coord: 40..69
e-value: 0.0016
score: 27.7
coord: 237..266
e-value: 30.0
score: 13.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 300..326
score: 8.656
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 72..104
score: 10.179
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 204..236
score: 12.235
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..66
score: 11.033
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 105..137
score: 10.927
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 107..266
e-value: 7.4E-41
score: 141.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..106
e-value: 4.7E-16
score: 60.6
coord: 269..381
e-value: 1.3E-9
score: 39.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 39..349
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 34..101
e-value: 8.9E-10
score: 39.0
coord: 143..231
e-value: 1.8E-12
score: 47.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 40..326
score: 56.185
NoneNo IPR availablePANTHERPTHR24126FAMILY NOT NAMEDcoord: 41..163
coord: 141..351
coord: 72..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6485contigEcto-sp13_S_contig6485:3056..5824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6485.17270.1mRNA_Ecto-sp13_S_contig6485.17270.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6485 2959..7814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6485.17270.1 ID=prot_Ecto-sp13_S_contig6485.17270.1|Name=mRNA_Ecto-sp13_S_contig6485.17270.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=478bp
MDSGDLLGVAILTKSEDDVRRMIGKPGFRRHSLNQVLRSGGHTPLALATS
AGRLGMVKLLIEAGADPLAYCDGDNCIHVAARYGHPKIVSELIRRGISVE
VSTLDQRRPLFIAAQQSSVETVQVLIEAGADIEFRHEGFFTALFMAAQSG
RTGVAIELIKSGAYMGPQGRHSWTPLMQSAHRGYLEIAEALLEHQCPPDS
RNEQGCTALHLAASANQAGLMKLLLDYGADRDLETVEGATPLQWAVQESH
MEAAVLLTNYRPSAVRRPPDSLHLCVLRNDMGGARDLLDRGAPPDHADRD
GVTPLQSAVLIASPRMVEVMLRGGADESAALPAARAGGKAGVTPLALSSA
RLSGRRQECADARVARARVRVRDALLRVGAVRAGCWRWPELLEVRPAASG
EGAATRSAFSSAGRAVQGKNGVGSGDGLGASSGRGRIPGVGLLRLGNRDR
STRAALMTTTALNRYVSRSVCKQDLER*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom