prot_Ecto-sp13_S_contig6478.17261.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6478.17261.1
Unique Nameprot_Ecto-sp13_S_contig6478.17261.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length419
Homology
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 539 bits (1388), Expect = 2.320e-174
Identity = 380/433 (87.76%), Postives = 387/433 (89.38%), Query Frame = 0
Query:    1 SLKVECPSTVRTKLLATHKVNFVKIQSRVRRRRWCRGCIFGRRCFGDGRGRRPAATHLRSPAARAWR-----GSMSPQSSPWKRPMLRALSTHVSAEDGLTVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPGLRRTSAASLPSTVASGTSSGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RREYDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANPRDEGAHSSLEHRKSLREQHDLHFDSARRLVSRATLIVVPVSLVGQWAE 419
            +LKVEC STVRTKLLA+HKVNF+KIQSRVRRRRWCRGC  GR CFGDGRGRRPAATHLRSPAAR+ R     G  SPQSSPWKRPMLRALSTHVSAEDGLTVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIE+QPVQFVSTRPGLRRT AAS              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXX         RREYDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANPRD G+HSSL+HRKSLREQ D HFDSARRLVSRATLIVVPVSLVGQWAE
Sbjct:    5 TLKVECLSTVRTKLLASHKVNFLKIQSRVRRRRWCRGCP-GRCCFGDGRGRRPAATHLRSPAARSARVDDRHGPQSPQSSPWKRPMLRALSTHVSAEDGLTVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEKQPVQFVSTRPGLRRTPAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDSGVAAXXXXXXXXXXXXXXXXAAARREYDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANPRDGGSHSSLKHRKSLREQPDRHFDSARRLVSRATLIVVPVSLVGQWAE 436          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: A0A6H5JHJ8_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ8_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 2.530e-86
Identity = 301/493 (61.05%), Postives = 315/493 (63.89%), Query Frame = 0
Query:    1 SLKVECPSTVRTKLLATHKVNFVKIQSR--VRRRRW----------------CR-----------GCIF-------------GRRCF---------------------------GDGRG--RRPAATHLRSPAARAWRGSMSPQSSPWKRPMLRALSTHVSAEDGLTVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPGLRRTSAAS---LPSTVASGTSSGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRREYDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANPRDEGAHSSLEHRKSLREQHDLHFDSARRLVSRATLIVVPVSLVGQWAE 419
            +LKV C S VRTKLLA HKVNFVKIQSR  +  R W                CR            C               G+R                             GDG G      A    + AA   +   + QSSPWKRPMLRALSTHV  + GL VTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPG+RRT AAS                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RREYDFSLAGILKSAESSGYRVVDPQ +  ++DL  +  +                                            EPPHITGGLLCEEMGLGKTIEVLSTILANPRD GAHSSLEHRKSLREQH  H+DS RRLVSRATLIVVPVSLVGQWAE
Sbjct:   55 TLKVACLSAVRTKLLAAHKVNFVKIQSRPCLVVRTWDQDGEFTSRAGEHVPVCRLLDAVTTGLVTSCAVVAPSSGTTISAAGGKRVGHTAAVGVGTSAAAXXXXXPPANDGCDGGDGTGDVSSAVAASETNEAADLLQHVYALQSSPWKRPMLRALSTHVPTDYGLAVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPGVRRTPAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARREYDFSLAGILKSAESSGYRVVDPQASITSIDLADWSTAEL------------------------------------------EPPHITGGLLCEEMGLGKTIEVLSTILANPRDGGAHSSLEHRKSLREQHGRHYDSGRRLVSRATLIVVPVSLVGQWAE 505          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: W7TYI3_9STRA (Dna excision repair protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYI3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 7.520e-37
Identity = 107/318 (33.65%), Postives = 138/318 (43.40%), Query Frame = 0
Query:   72 PQSSPWKRPMLRALST---------------HVSAEDGLTVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPGLRRTSAASLPSTVASGTSSGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRREYDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAP---LWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANP 371
            PQSSPW+RPM+R L++                  A+  + VT+ +Y  RL+FELIA+     +M +L P   V   A +     +F  +  G  R S+    +  A  TSS                                                                                          RR++ FSL G+L +AES+GY V DPQP  LTV +F +Q+S+ QWMLD ER P  LN YFWERR W D        +YFP AGE RL +PPH TGG+LCEEMGLGKT+E L+ ILANP
Sbjct:  225 PQSSPWRRPMIRLLTSLQPPPAILLAPDEPEEEEADLNVEVTFHVYFGRLIFELIANSDTQALMAALTPAGDVFSAARLPPSTGRFRRSPSGAPRPSS----NATAGATSSNGVVDVVEESEGEGRVKERRSEVGGEEASVGGVLEPGGGDHGPEQEATSVPGATEGLSATPWERA-------------------------RRDFQFSLPGLLHAAESTGYAVRDPQPRGLTVSMFEFQRSTLQWMLDRERGP-SLNEYFWERRAWKDAETAEECFYYFPDAGELRLEKPPHRTGGVLCEEMGLGKTVECLALILANP 512          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: A0A4D9CZ02_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ02_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.910e-36
Identity = 113/337 (33.53%), Postives = 146/337 (43.32%), Query Frame = 0
Query:   53 PAATHLRSPAARAWRGSMSPQSSPWKRPMLRALSTHVS---------------AEDGLTVTYFIYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPGLRRTSAASLPSTVASGTSSGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRREYDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAP---LWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANP 371
            P  +H  S   R W    +PQSSPW+RPM+R L++  S               A+  + VT+ +Y  RL+FELIA+     +M +L P   V   A +     +F  +  G  R S+    +  A  TSS                                                                                          RR++ FSL G+L +AES+GY V DPQP  LTV +F +Q+S+ QWMLD ER P  LN YFWERR W D        +YFP AGE RL +PPH TGG+LCEEMGLGKT+E L+ ILANP
Sbjct:  208 PEESHA-SVMERLW-SLQNPQSSPWRRPMIRLLTSLQSPPAMLLAPDEPEKEEADLNVEVTFHVYFGRLIFELIANSDTQALMAALTPAGDVFSAARLPPSTGRFRRSPSGAPRPSS----NATAGATSSNGVMDVVEESEGEGRVKERRSEVGGEEASVGGVLEPGGGDHGPEQEATSVPGATEGLSATPWERM-------------------------RRDFQFSLPGLLHAAESTGYAVRDPQPRGLTVSMFEFQRSTLQWMLDRERGP-SLNEYFWERRAWKDAETAEECFYYFPDAGELRLEKPPHRTGGVLCEEMGLGKTVECLALILANP 512          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: A0A835Z3A0_9STRA (SNF2-rel_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3A0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.900e-33
Identity = 74/135 (54.81%), Postives = 84/135 (62.22%), Query Frame = 0
Query:  262 DFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQ---------------WMLDHERD--PRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITG------------GLLCEEMGLGKTIEVLSTI 367
            DF L+G+L+ AES GY    PQP  LTV LF +Q+S+ Q               WMLDHE D  P GLNGYFWERREWADGGAPLWYFPLAGE  L  PP  TG            GLLCEEMGLGKT+E ++ +
Sbjct:  420 DFKLSGLLRVAESEGYAWRVPQPPQLTVQLFEFQRSTYQXXXXXXXXXXXXXXXWMLDHEHDANPGGLNGYFWERREWADGGAPLWYFPLAGELGLHPPPRDTGEFXXXXXXXXXGGLLCEEMGLGKTVEAVARV 554          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: A0A7S0DGF1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DGF1_9EUKA)

HSP 1 Score: 137 bits (344), Expect = 2.350e-31
Identity = 75/163 (46.01%), Postives = 100/163 (61.35%), Query Frame = 0
Query:  261 YDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPR-GLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANPRDEGAHSSLEHRKSLREQHD-----LHFDSARRLVSRATLIVVPVSLVGQW 417
            Y F+LAG+LK+ E SGYR   PQP D+++ L  YQ+ +  WM DHE  P  GLN  FWE R+W DGG+  +YFP AGE RL  PP + GGLLCEEMGLGKT+E++S I+ + +     S   + KS     D        D  +   S  TL++VP++L+ QW
Sbjct:  308 YIFTLAGLLKAHEHSGYREA-PQPRDVSLTLKTYQRQTLAWMQDHESLPNMGLNSLFWEERQWLDGGS-YYYFPAAGELRLERPPTVRGGLLCEEMGLGKTLEMVSLIVTDLQKNSLGS---YSKSPTPNFDSMECVTERDKTQEFESDTTLVIVPLTLLDQW 465          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: A0A7S0NI25_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NI25_MICPS)

HSP 1 Score: 124 bits (312), Expect = 9.690e-31
Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 0
Query:  263 FSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILAN 370
            F+L G+L +A S GY     QP +L + L  +Q+ +  WM D ER  RGLNG FWE R WADGG   WYFPLAGE RL+EPP + GG+L EEMGLGKT+EVL+ + A+
Sbjct:   10 FTLPGLLAAAVSDGYDEC-AQPPNLALPLMDFQRQTLAWMRDKERSERGLNGVFWEERRWADGGK-YWYFPLAGELRLSEPPLVRGGMLSEEMGLGKTLEVLALVSAD 115          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: A0A0M0JTW2_9EUKA (Snf2 super family n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JTW2_9EUKA)

HSP 1 Score: 129 bits (323), Expect = 2.130e-28
Identity = 76/161 (47.20%), Postives = 91/161 (56.52%), Query Frame = 0
Query:  263 FSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILAN------PRDEGAHSSLEHRKSLREQHDLHFDSARRLVSRATLIVVPVSLVGQW 417
            FSL G+LK+ E  GYR    Q   L + L PYQQ +  WM+D E  PRG+NG FWE R +ADGGA  +Y P  GE RL  PP + GGLLC+EMGLGKT+EV++ +LA       P  EG                        L SRATLIVVP +LV QW
Sbjct:  292 FSLEGLLKATEHCGYRA-HVQQEGLALTLKPYQQQAVAWMVDMEALPRGINGLFWEVRPFADGGA-FYYSPQLGEMRLGAPPVMHGGLLCDEMGLGKTLEVVALVLATLAQPLEPTAEGC-----------------------LPSRATLIVVPPTLVSQW 427          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: C1EH46_MICCC (SNF2 super family n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EH46_MICCC)

HSP 1 Score: 125 bits (314), Expect = 3.030e-27
Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 0
Query:  263 FSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILAN 370
            F+L G+L +A S GY    P P +L + L  +Q+ +  WM D ER  RGLNG FWE R WADGG   WYFPLAGE RL+EPP + GG+L EEMGLGKT+EVL+ + A+
Sbjct:  325 FTLPGLLAAAVSDGYDEC-PTPPNLALPLMDFQRQTLAWMRDKERSERGLNGVFWEERRWADGGK-YWYFPLAGELRLSEPPLVRGGMLSEEMGLGKTLEVLALVSAD 430          
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Match: F0XXK2_AURAN (FHA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK2_AURAN)

HSP 1 Score: 125 bits (314), Expect = 3.400e-27
Identity = 70/159 (44.03%), Postives = 97/159 (61.01%), Query Frame = 0
Query:  263 FSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANPRDEGAHSSLEHRKSLREQHDLHFDSARR--LVSRATLIVVPVSLVGQWAE 419
            F+L G+++SAE  G    D QPA++ + + PYQ  + +WM   E   RGLNG FWERR++ DGG   +Y P  GE RL  PP + GGLL +EMG+GKT+E+LS + A P    A ++ +     RE  D   D A +    SRATL+V+P +LV QW +
Sbjct: 1717 FTLEGVMRSAEHCG-GPEDAQPAEIALPMKPYQLMALRWMRSMEELDRGLNGLFWERRDFVDGGC-FYYAPDLGEARLEAPPTVHGGLLSDEMGMGKTLEMLSLVCARPATAAALAAADLAADEREAPD---DGAAKPLAASRATLLVLPPALVSQWLD 1870          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6478.17261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K8_ECTSI2.320e-17487.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHJ8_9PHAE2.530e-8661.05SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
W7TYI3_9STRA7.520e-3733.65Dna excision repair protein n=2 Tax=Nannochloropsi... [more]
A0A4D9CZ02_9STRA1.910e-3633.53Helicase ATP-binding domain-containing protein n=1... [more]
A0A835Z3A0_9STRA2.900e-3354.81SNF2-rel_dom domain-containing protein n=1 Tax=Tri... [more]
A0A7S0DGF1_9EUKA2.350e-3146.01Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S0NI25_MICPS9.690e-3155.56Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A0M0JTW2_9EUKA2.130e-2847.20Snf2 super family n=1 Tax=Chrysochromulina tobinii... [more]
C1EH46_MICCC3.030e-2755.56SNF2 super family n=1 Tax=Micromonas commoda (stra... [more]
F0XXK2_AURAN3.400e-2744.03FHA domain-containing protein n=1 Tax=Aureococcus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 294..418
e-value: 5.2E-16
score: 58.3
NoneNo IPR availablePANTHERPTHR45865FAMILY NOT NAMEDcoord: 279..418
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 280..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6478contigEcto-sp13_S_contig6478:1531..6192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6478.17261.1mRNA_Ecto-sp13_S_contig6478.17261.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6478 1531..6192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6478.17261.1 ID=prot_Ecto-sp13_S_contig6478.17261.1|Name=mRNA_Ecto-sp13_S_contig6478.17261.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=419bp
SLKVECPSTVRTKLLATHKVNFVKIQSRVRRRRWCRGCIFGRRCFGDGRG
RRPAATHLRSPAARAWRGSMSPQSSPWKRPMLRALSTHVSAEDGLTVTYF
IYTSRLLFELIADPAISGMMKSLEPVAQVTPPAVIEEQPVQFVSTRPGLR
RTSAASLPSTVASGTSSGTAAAACGRAGANGGSSSSSSGRRGGSSAGGRG
NAQREEDRSKRGGRGGGGGRGGGGGSSTDLAAVAVAAMAATGRGGSDDSG
VAATAAARREYDFSLAGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQ
WMLDHERDPRGLNGYFWERREWADGGAPLWYFPLAGEFRLAEPPHITGGL
LCEEMGLGKTIEVLSTILANPRDEGAHSSLEHRKSLREQHDLHFDSARRL
VSRATLIVVPVSLVGQWAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR027417P-loop_NTPase