prot_Ecto-sp13_S_contig64683.17247.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig64683.17247.1
Unique Nameprot_Ecto-sp13_S_contig64683.17247.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
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BLAST of mRNA_Ecto-sp13_S_contig64683.17247.1 vs. uniprot
Match: Q8QNP6_ESV1K (EsV-1-13 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP6_ESV1K)

HSP 1 Score: 86.3 bits (212), Expect = 1.960e-18
Identity = 37/59 (62.71%), Postives = 49/59 (83.05%), Query Frame = 0 
Query:    1 MGDLIVEALREIDGYNGLNVHQGNNYVGSHMSRLWNWMLLLIDHAKTMALPLLNENSVN 59
            MG++IVEAL+EID YN ++VH G N+VGSHM+ LWNW++ + DH +TM+LP LN NSVN
Sbjct:  215 MGEMIVEALQEIDTYNNVDVHHGINHVGSHMTHLWNWLISMTDHTETMSLPPLNYNSVN 273
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig64683.17247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNP6_ESV1K1.960e-1862.71EsV-1-13 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig64683contigEcto-sp13_S_contig64683:196..372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig64683.17247.1mRNA_Ecto-sp13_S_contig64683.17247.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig64683 41..372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig64683.17247.1 ID=prot_Ecto-sp13_S_contig64683.17247.1|Name=mRNA_Ecto-sp13_S_contig64683.17247.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
MGDLIVEALREIDGYNGLNVHQGNNYVGSHMSRLWNWMLLLIDHAKTMAL
PLLNENSVN
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