prot_Ecto-sp13_S_contig64654.17244.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig64654.17244.1
Unique Nameprot_Ecto-sp13_S_contig64654.17244.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp13_S_contig64654.17244.1 vs. uniprot
Match: D7FR31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR31_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 3.460e-36
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0 
Query:    1 MARRETKVPRRPQTKVSGPFKLPTRPQPTSSSSRG-GRGFGLWESLLEGKTAAARRRGVVLLIVRLPPAGVLLLPGPR 77
            MAR+ETKVPRR QTKVSGPFKLP RPQPTSSSSRG GRGFGLWESLLEGKTAA RRRGVVLLIVRLPPAGVLLL  PR
Sbjct:    1 MARQETKVPRRQQTKVSGPFKLPVRPQPTSSSSRGAGRGFGLWESLLEGKTAA-RRRGVVLLIVRLPPAGVLLLLVPR 77
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig64654.17244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR31_ECTSI3.460e-3691.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig64654contigEcto-sp13_S_contig64654:20..253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig64654.17244.1mRNA_Ecto-sp13_S_contig64654.17244.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig64654 20..253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig64654.17244.1 ID=prot_Ecto-sp13_S_contig64654.17244.1|Name=mRNA_Ecto-sp13_S_contig64654.17244.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
MARRETKVPRRPQTKVSGPFKLPTRPQPTSSSSRGGRGFGLWESLLEGKT
AAARRRGVVLLIVRLPPAGVLLLPGPR*
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