prot_Ecto-sp13_S_contig6460.17238.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6460.17238.1
Unique Nameprot_Ecto-sp13_S_contig6460.17238.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6460.17238.1 vs. uniprot
Match: D8LLC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC9_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 7.190e-67
Identity = 161/199 (80.90%), Postives = 162/199 (81.41%), Query Frame = 0 
Query:    1 MNFIKKVTGVGGDAEAAPTPAPAPTDXXXXXXXXXDTPEKTTPPPAGIGMLAGAIHSVVGXXXXXXXXXXXXXXXXXXXX-AEAETPGIIGNLTSTITNAAHSVTDAAAGIVGGGKKDGADAAAVEVTSXXXXXXXXXXXXXXXXGGIXGFLSNVTHTVTDGVKGAMGAVRDEIQADIKPSLKDDPAPADAAADAAPAK 198
            MNFIKKVTG GGDAEAAPTPAPAPTD XXXXXXXX          AGIGMLAG I SVVGXXXXXXXXXXXXXXXXXX   AEAETPGIIGNLTSTITNAAHSVTDAA GIVGGGKK GADAAAVEV +                GGIX FLSNVTHTVTDGVKGAMGAVRDEIQADIKPSLKDDPAPADAAADAAPAK
Sbjct:    1 MNFIKKVTGAGGDAEAAPTPAPAPTDAXXXXXXXXXXXXXXXXXAAGIGMLAGVIQSVVGXXXXXXXXXXXXXXXXXXAPPAEAETPGIIGNLTSTITNAAHSVTDAATGIVGGGKKGGADAAAVEVPAVPAVETPEEGKEG---GGIXXFLSNVTHTVTDGVKGAMGAVRDEIQADIKPSLKDDPAPADAAADAAPAK 196
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BLAST of mRNA_Ecto-sp13_S_contig6460.17238.1 vs. uniprot
Match: A0A6H5JTZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ4_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 3.830e-56
Identity = 144/149 (96.64%), Postives = 146/149 (97.99%), Query Frame = 0 
Query:   50 MLAGAIHSVVGXXXXXXXXXXXXXXXXXXXXAEAETPGIIGNLTSTITNAAHSVTDAAAGIVGGGKKDGADAAAVEVTSXXXXXXXXXXXXXXXXGGIXGFLSNVTHTVTDGVKGAMGAVRDEIQADIKPSLKDDPAPADAAADAAPAK 198
            MLAGAI SVVGXXXXXXXXXXXXXXXXXXXXAEAETPGIIGNLTSTITNAAHSVTD AAGI+GGGKKDGADAAAVEVTSXXXXXXXXXXXXXXXXGGI GFL+NVTHTVTDGVKGAMGAVRDEIQADIKPSLKDDPAPADAAADAAPAK
Sbjct:    1 MLAGAIQSVVGXXXXXXXXXXXXXXXXXXXXAEAETPGIIGNLTSTITNAAHSVTDTAAGIIGGGKKDGADAAAVEVTSXXXXXXXXXXXXXXXXGGIGGFLANVTHTVTDGVKGAMGAVRDEIQADIKPSLKDDPAPADAAADAAPAK 149
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6460.17238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLC9_ECTSI7.190e-6780.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTZ4_9PHAE3.830e-5696.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6460contigEcto-sp13_S_contig6460:4005..6648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6460.17238.1mRNA_Ecto-sp13_S_contig6460.17238.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6460 4005..6650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6460.17238.1 ID=prot_Ecto-sp13_S_contig6460.17238.1|Name=mRNA_Ecto-sp13_S_contig6460.17238.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
MNFIKKVTGVGGDAEAAPTPAPAPTDAPTPSPAPADTPEKTTPPPAGIGM
LAGAIHSVVGGGSSSSSSGTAAGGEAPPPPAEAETPGIIGNLTSTITNAA
HSVTDAAAGIVGGGKKDGADAAAVEVTSVPAVPAVETPEEGKEGGGIGGF
LSNVTHTVTDGVKGAMGAVRDEIQADIKPSLKDDPAPADAAADAAPAK*
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