prot_Ecto-sp13_S_contig6459.17234.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6459.17234.1
Unique Nameprot_Ecto-sp13_S_contig6459.17234.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length257
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6459.17234.1 vs. uniprot
Match: D7FUT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT3_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 3.790e-143
Identity = 227/254 (89.37%), Postives = 234/254 (92.13%), Query Frame = 0 
Query:    3 LRLRLARGELELVRRVLCQSRAILGEEVRRCTPAITTNNSDFERADSRAVTPAVANYSEATEMLVVQIMVPCGEFTEAVALVSSDAYLSPKDKSQLLKDCGHSASGRERESSAAAGQGTTGNVSNTAPDSRSPCGRSGPSHSSYREDYREETTGGPQRDGRTRLEHSPSPDEVGAAFCHQQRQQEQSPLQKFFSDVSDWTPEARVQLVVGAGAAGLAAYAALRNRDSLWRAARSAAGVAARTAGDVGAFIVGSS 256
            LRLRLA GELELVRR+L Q RA LGEEVRRCTPA+T NNSDFERA S AVTPAVANYSEATEMLVVQIMVPCGEFTEA ALVSSDAYLSPKDKSQLLK C  SAS RERES AA G+G+TGN SNTA  SRSPCGR GPSHSSYREDYREET GGPQRDGRTRLEHS SPDE+GAAFCHQQRQQ+QSPLQKFFSDVSDWTPEARVQLVVGAGAAGLAAYAALRNRDSLWRAAR+AAGVAARTAGDVGAFIVGSS
Sbjct:  146 LRLRLAGGELELVRRILWQLRAELGEEVRRCTPAVTANNSDFERAHSGAVTPAVANYSEATEMLVVQIMVPCGEFTEAEALVSSDAYLSPKDKSQLLKACEQSASERERESGAATGEGSTGNASNTASGSRSPCGRGGPSHSSYREDYREETKGGPQRDGRTRLEHSSSPDELGAAFCHQQRQQQQSPLQKFFSDVSDWTPEARVQLVVGAGAAGLAAYAALRNRDSLWRAARNAAGVAARTAGDVGAFIVGSS 399
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BLAST of mRNA_Ecto-sp13_S_contig6459.17234.1 vs. uniprot
Match: A0A6H5K3P0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P0_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 4.220e-130
Identity = 212/254 (83.46%), Postives = 222/254 (87.40%), Query Frame = 0 
Query:    3 LRLRLARGELELVRRVLCQSRAILGEEVRRCTPAITTNNSDFERADSRAVTPAVANYSEATEMLVVQIMVPCGEFTEAVALVSSDAYLSPKDKSQLLKDCGHSASGRERESSAAAGQGTTGNVSNTAPDSRSPCGRSGPSHSSYREDYREETTGGPQRDGRTRLEHSPSPDEVGAAFCHQQRQQEQSPLQKFFSDVSDWTPEARVQLVVGAGAAGLAAYAALRNRDSLWRAARSAAGVAARTAGDVGAFIVGSS 256
            LRLRLA GELELVR+ L Q RA+LGEEVRRCTP +T NNSDF+RADSRAVT A+ANYSEATEMLVVQI+VPCGEFTEAVALVSSD YLSPKDKSQLLK C  SAS RERES A AG+G TGN SNT   SRSPCGR GP HSSYR D REET GGPQRD RTRLE+  SPD +GAAFC QQRQQ+QSPLQKFFSDVSDWTPEARVQL V AGAAGLAAYAALRNRDSLWRAARS AGVAARTAGDVGAFIVGSS
Sbjct:  145 LRLRLAGGELELVRKNLSQLRAVLGEEVRRCTPTVTANNSDFQRADSRAVTQALANYSEATEMLVVQILVPCGEFTEAVALVSSDDYLSPKDKSQLLKACEQSASERERESGALAGEGATGNASNTPARSRSPCGRGGPLHSSYRGDCREETAGGPQRDRRTRLENLSSPDALGAAFCRQQRQQQQSPLQKFFSDVSDWTPEARVQLAVRAGAAGLAAYAALRNRDSLWRAARSVAGVAARTAGDVGAFIVGSS 398
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6459.17234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUT3_ECTSI3.790e-14389.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3P0_9PHAE4.220e-13083.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6459contigEcto-sp13_S_contig6459:7454..8224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6459.17234.1mRNA_Ecto-sp13_S_contig6459.17234.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6459 7454..8224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6459.17234.1 ID=prot_Ecto-sp13_S_contig6459.17234.1|Name=mRNA_Ecto-sp13_S_contig6459.17234.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp
LRLRLRLARGELELVRRVLCQSRAILGEEVRRCTPAITTNNSDFERADSR
AVTPAVANYSEATEMLVVQIMVPCGEFTEAVALVSSDAYLSPKDKSQLLK
DCGHSASGRERESSAAAGQGTTGNVSNTAPDSRSPCGRSGPSHSSYREDY
REETTGGPQRDGRTRLEHSPSPDEVGAAFCHQQRQQEQSPLQKFFSDVSD
WTPEARVQLVVGAGAAGLAAYAALRNRDSLWRAARSAAGVAARTAGDVGA
FIVGSS*
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