prot_Ecto-sp13_S_contig6459.17233.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6459.17233.1
Unique Nameprot_Ecto-sp13_S_contig6459.17233.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: D7FUT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUT2_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 6.520e-122
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK 208
            MGNK+SLENELINLRLTSKQQQR AIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK
Sbjct:    1 MGNKVSLENELINLRLTSKQQQRGAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK 208          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A836C887_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C887_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.030e-77
Identity = 141/208 (67.79%), Postives = 162/208 (77.88%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK 208
            MGNK+SLE ELINL+LT+KQ QRS+ KC K E AAKAK++ AI+ GN+EGA+I  QNAIREKNQSLN LRL+SRIDAVA+RLETA+RMKQV+KSM+            MDVERISKTMD FE+QFEDMDV AGYMEN+MG +TAMSTP +QVD LIQMVADE GLE+  QLDDAG V   VP    A PAAA    D+L+ RLA LRK
Sbjct:    1 MGNKVSLETELINLKLTAKQMQRSSTKCNKAEAAAKAKVKVAIQKGNMEGAKIAAQNAIREKNQSLNYLRLASRIDAVAARLETAVRMKQVDKSMQGVVKGMRKALKTMDVERISKTMDQFEKQFEDMDVVAGYMENSMGATTAMSTPADQVDQLIQMVADEHGLEVASQLDDAGKVGAAVPQ---AGPAAA----DDLSQRLADLRK 201          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A836CEV0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 3.680e-76
Identity = 138/208 (66.35%), Postives = 159/208 (76.44%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK 208
            MGNK+SLE ELIN+RLTSKQ QR++ KC KNE +AK +++ +I+ GN+EGA+I  QNAIREKNQ+LN LRLSSRIDAV+SRLETAIR KQ+NKSME            MDVERIS TMD FE+QFEDMDV AGYMEN+MG +TAMSTP +QVD LIQMVADE GLE+G +LDDAG V   VPA    A    A E D LA RLA LRK
Sbjct:    1 MGNKVSLEEELINMRLTSKQMQRASKKCEKNEASAKNRVKLSIQKGNMEGAKIEAQNAIREKNQALNYLRLSSRIDAVSSRLETAIRTKQMNKSMEGVVKGMKSALASMDVERISSTMDQFEKQFEDMDVVAGYMENSMGTTTAMSTPPDQVDNLIQMVADEHGLEVGSKLDDAGRVGTTVPA----AQQQPAQEVDALAQRLADLRK 204          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A7S2L033_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L033_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.040e-68
Identity = 123/207 (59.42%), Postives = 154/207 (74.40%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALR 207
            MGNKISLE+ELINLR+TSK   RS++KC K+E AA  +L++AIK GN EGARIY Q+AIREKNQ++N LR++SRIDAVA+RLETAIRM  VNKSM+            M++E +SKTMD FEQQFED+DV++GYME AM  +TA  TP +QVD LI+ VADE  LELG+   +AGPV   VP++P       A ++D+LA RLA LR
Sbjct:    1 MGNKISLEDELINLRITSKSMNRSSVKCKKSEKAALDRLKKAIKQGNTEGARIYAQDAIREKNQAVNHLRMASRIDAVAARLETAIRMDTVNKSMQGVVKGMSKGMASMNIEEMSKTMDKFEQQFEDLDVKSGYMEEAMNTTTATQTPADQVDHLIKYVADENQLELGDAFLEAGPVGTTVPSQPEKV----AADKDDLAARLANLR 203          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A7S1Z7S6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7S6_TRICV)

HSP 1 Score: 216 bits (550), Expect = 4.240e-68
Identity = 124/207 (59.90%), Postives = 149/207 (71.98%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALR 207
            MGNKISLE+ELINLR+TSKQ QRSA KC KNE AA  KL++AIK GN EGARIYGQ+AIREKNQ+LNC+R++SRIDAV+SR+ETA+RM QV  SM+            M++E++S TMD FE QFED+DV+  YME AM  +TA STP EQVD LI MVADE  LELG+   +AGPV  K P        +    +D+L  RLA LR
Sbjct:    1 MGNKISLEDELINLRITSKQMQRSAKKCEKNEKAALEKLKKAIKQGNAEGARIYGQDAIREKNQALNCIRMASRIDAVSSRIETAVRMNQVTSSMKGVVKGMEKGLQSMNIEQLSATMDKFESQFEDLDVKTQYMEGAMNATTATSTPAEQVDELITMVADENNLELGDAFAEAGPVGKKAPEVKQPEKESV---QDDLEARLANLR 204          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A7S4MGQ3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGQ3_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.660e-67
Identity = 125/207 (60.39%), Postives = 153/207 (73.91%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALR 207
            MGN +SLE+ELINLR+TSKQ QRSA KC KNE AA  KL++AIK+GN EGARIYGQ+AIREKNQ+LNC+R++SRIDAVASR+ETA+RM  V KSM+            M+VE+++ TMD FE QFED+DV+  YME AM  +TA +TP EQVD LI +VADE  L+LGE+  +AG V  K+     AAPA A   ED+L  RLA LR
Sbjct:    1 MGNSVSLEDELINLRITSKQMQRSAKKCEKNEKAAIEKLKKAIKSGNPEGARIYGQDAIREKNQALNCMRMASRIDAVASRIETAVRMNTVTKSMKGVVKGMDKGLASMNVEQMASTMDKFEAQFEDLDVKTQYMEGAMNSTTATTTPAEQVDELINLVADENNLDLGEEFAEAGTVG-KIKQPKEAAPAKA---EDDLEARLANLR 203          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A7S3JWC9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWC9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 8.650e-65
Identity = 121/208 (58.17%), Postives = 154/208 (74.04%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALRK 208
            MGNK+SL++ELINL++TS+Q   ++ KC K    AK ++++AI+ GN+EGARIY QNAIREKNQ+LN LR++SRIDAVA RLETAIR   ++K+M             MDVE+ISKTMD+FE+QFEDMDVRAGYMEN+M  STA +TP++QVD LI  VADE  L+L   LDDAG VS KVP +   +     G+ED LA+RL ALR+
Sbjct:    1 MGNKVSLQDELINLKITSRQMTSASKKCEKGARTAKNQVKKAIEKGNMEGARIYAQNAIREKNQALNYLRMASRIDAVAQRLETAIRTNDMSKAMGNVVKGMSSALKSMDVEKISKTMDAFEKQFEDMDVRAGYMENSMNASTASATPEDQVDSLISEVADEHQLDLSFALDDAGAVSTKVPQEQKQSE----GKED-LASRLDALRR 203          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A7S2GWE3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GWE3_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.910e-62
Identity = 116/206 (56.31%), Postives = 147/206 (71.36%), Query Frame = 0
Query:    2 GNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALR 207
            G K +LE+ELINL++TSKQ QR A KC +NE AA  K+++AIK GN EGA+I+ Q+AIREKNQ+LNCLR++SRIDAVASRLETA+RM  +++SM             MDVE++++TMD FE QFED+DVR  YM++AM  +TA +TP +QVD LI MVADE  LELGE  ++AGPV  K P    A    A    D+L  RLA LR
Sbjct:    5 GKKPTLEDELINLKITSKQMQRQAKKCERNEKAAIEKVKKAIKQGNKEGAQIHAQDAIREKNQALNCLRMASRIDAVASRLETAVRMNSLSQSMTGVVRGMSTGLQSMDVEKMAQTMDKFESQFEDLDVRTQYMDDAMNSTTASTTPADQVDSLIHMVADENELELGEAFNEAGPVGKKTPQPTVAEETKAT---DDLEARLANLR 207          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A7S3HAK8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAK8_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.710e-62
Identity = 122/207 (58.94%), Postives = 142/207 (68.60%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALR 207
            MG K SLE++LI  RLTSKQ  RSA KC KN    K KL++AI+ GN+EGARIY QN IREKNQSLN LRL SRIDAVASRLETAIRM+ VNK+M             M+VE+I+KTM  FE+ FEDMDVR+GYME+ M  +T+M+TP E VD L++MVADEAGL+L  QLD  G  S    A        AA    EL  RLAALR
Sbjct:    1 MGQKHSLEDDLIQFRLTSKQMARSAKKCDKNMETQKNKLKKAIEQGNMEGARIYAQNVIREKNQSLNFLRLGSRIDAVASRLETAIRMQDVNKAMVMTVKGMSNAMKSMEVEQIAKTMQDFEKTFEDMDVRSGYMESTMDATTSMTTPPEDVDNLMRMVADEAGLQLAGQLDAPGTHSVATAAGQQQTAGPAADPASELEARLAALR 207          
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Match: A0A7S2SCB7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCB7_9STRA)

HSP 1 Score: 200 bits (508), Expect = 9.030e-62
Identity = 120/207 (57.97%), Postives = 146/207 (70.53%), Query Frame = 0
Query:    1 MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEGARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEXXXXXXXXXXXXMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQEQVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELANRLAALR 207
            MGNKISLE+ELINLR+TSKQ QRSA K  KNE A   KL++AIK GN EGA+IYGQ+AIREKNQ+LNC R++SR+DAV+SR+ETAIRM +V+K+M+            M+VE +SK MD FE QFED+DV+A YME  M  +TA  TP EQVD LI MVAD+  L LG++  +  P S KVP      P A   E D L  RLA+LR
Sbjct:    1 MGNKISLEDELINLRITSKQMQRSAKKSEKNEKANIEKLKQAIKKGNSEGAKIYGQSAIREKNQALNCQRMASRVDAVSSRIETAIRMGEVSKTMKGVTKGMEKGLQAMNVEELSKIMDKFETQFEDLDVKAEYMEGTMNATTATITPAEQVDELIHMVADQNNLALGDEFTELVP-SKKVPQ-----PQAEEKEADSLEARLASLR 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6459.17233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUT2_ECTSI6.520e-12299.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C887_9STRA2.030e-7767.79Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836CEV0_9STRA3.680e-7666.35Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2L033_9STRA2.040e-6859.42Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1Z7S6_TRICV4.240e-6859.90Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4MGQ3_9STRA1.660e-6760.39Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3JWC9_9STRA8.650e-6558.17Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2GWE3_9STRA1.910e-6256.31Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3HAK8_9STRA2.710e-6258.94Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SCB7_9STRA9.030e-6257.97Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 19..187
e-value: 3.2E-12
score: 46.4
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 7..207
NoneNo IPR availablePANTHERPTHR10476:SF2CHARGED MULTIVESICULAR BODY PROTEIN 1Bcoord: 7..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6459contigEcto-sp13_S_contig6459:4053..5417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6459.17233.1mRNA_Ecto-sp13_S_contig6459.17233.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6459 4053..6194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6459.17233.1 ID=prot_Ecto-sp13_S_contig6459.17233.1|Name=mRNA_Ecto-sp13_S_contig6459.17233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
MGNKISLENELINLRLTSKQQQRSAIKCTKNENAAKAKLREAIKAGNIEG
ARIYGQNAIREKNQSLNCLRLSSRIDAVASRLETAIRMKQVNKSMEGVVK
GMESALKAMDVERISKTMDSFEQQFEDMDVRAGYMENAMGDSTAMSTPQE
QVDGLIQMVADEAGLELGEQLDDAGPVSNKVPAKPAAAPAAAAGEEDELA
NRLAALRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam