prot_Ecto-sp13_S_contig64588.17231.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig64588.17231.1
Unique Name	prot_Ecto-sp13_S_contig64588.17231.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	90

Homology

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: A0A6H5KHI4_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI4_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.350e-51
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    2 SWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            SWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD
Sbjct:   21 SWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 109

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: D8LCJ1_ECTSI (Armadillo/beta-catenin-like repeat domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ1_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 2.010e-51
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    2 SWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            SWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD
Sbjct:  171 SWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 259

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: A0A7S2R949_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R949_9STRA)

HSP 1 Score: 163 bits (412), Expect = 5.580e-45
Identity = 78/84 (92.86%), Postives = 83/84 (98.81%), Query Frame = 0

Query:    2 SWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELAS 85
            SWRVTKPALRTIGNIVCAEDDTDYTQHII+AGAVPCL++LIAHSNREIQKEACWTLSNIAAGT+EQIQTVLDSGA+P LVELAS
Sbjct:  294 SWRVTKPALRTIGNIVCAEDDTDYTQHIIEAGAVPCLRELIAHSNREIQKEACWTLSNIAAGTIEQIQTVLDSGAVPPLVELAS 377

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: H3G600_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3G600_PHYRM)

HSP 1 Score: 150 bits (378), Expect = 8.660e-42
Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            SSWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNREIQKEACWTLSNIAAGTV+QIQ VLDSG +PSL+ LA+S   D
Sbjct:  224 SSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKEACWTLSNIAAGTVDQIQCVLDSGCIPSLMGLAASDTTD 313

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: A0A067CNS0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CNS0_SAPPC)

HSP 1 Score: 151 bits (381), Expect = 6.200e-41
Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            +SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNREIQKEACWTLSNIAAGTV+QIQ VLDSG +PSL+ LASS   D
Sbjct:  258 NSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRKLIAHSNREIQKEACWTLSNIAAGTVDQIQCVLDSGCIPSLMNLASSDATD 347

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: F0X0G9_9STRA (Importin subunit alpha putative n=2 Tax=Albugo TaxID=65356 RepID=F0X0G9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 7.110e-41
Identity = 73/90 (81.11%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    1 SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            SSWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNREIQKEACWTLSNIAAGTV+QIQ VLDSG +PSL+ LAS++  D
Sbjct:  412 SSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKEACWTLSNIAAGTVDQIQCVLDSGCIPSLMNLASAEATD 501

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: K3WWN8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWN8_GLOUD)

HSP 1 Score: 151 bits (382), Expect = 9.530e-41
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            SSWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNREIQKEACWTLSNIAAGTV+QIQ VLDSG +PSL+ LASS   D
Sbjct:  415 SSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKEACWTLSNIAAGTVDQIQCVLDSGCIPSLMGLASSDATD 504

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: A0A421GKL1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GKL1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.110e-40
Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            SSWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNREIQKEACWTLSNIAAGTV+QIQ VLDSG +PSL+ LA+S   D
Sbjct:  191 SSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKEACWTLSNIAAGTVDQIQCVLDSGCIPSLMGLAASDTTD 280

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BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: A0A485LIM5_9STRA (Aste57867_21593 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LIM5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.890e-40
Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            +SWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNREIQKEACWTLSNIAAGTV+QIQ VLDSG +PSL+ LASS   D
Sbjct:  366 NSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRKLIAHSNREIQKEACWTLSNIAAGTVDQIQCVLDSGCIPSLMGLASSDATD 455

[Close]

BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Match: D0NSN0_PHYIT (Importin subunit alpha, putative n=13 Tax=Peronosporaceae TaxID=4777 RepID=D0NSN0_PHYIT)

HSP 1 Score: 150 bits (379), Expect = 2.310e-40
Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQKEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD 90
            SSWRVTKPALR IGNIVCAEDD DYTQHII+ GAVP L++LIAHSNREIQKEACWTLSNIAAGTV+QIQ VLDSG +PSL+ LA+S   D
Sbjct:  387 SSWRVTKPALRAIGNIVCAEDDHDYTQHIIECGAVPSLRRLIAHSNREIQKEACWTLSNIAAGTVDQIQCVLDSGCIPSLMGLAASDATD 476

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig64588.17231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KHI4_9PHAE	1.350e-51	100.00	B box-type domain-containing protein n=1 Tax=Ectoc...	[more]
D8LCJ1_ECTSI	2.010e-51	100.00	Armadillo/beta-catenin-like repeat domain containi...	[more]
A0A7S2R949_9STRA	5.580e-45	92.86	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
H3G600_PHYRM	8.660e-42	81.11	Uncharacterized protein n=14 Tax=Peronosporaceae T...	[more]
A0A067CNS0_SAPPC	6.200e-41	81.11	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
F0X0G9_9STRA	7.110e-41	81.11	Importin subunit alpha putative n=2 Tax=Albugo Tax...	[more]
K3WWN8_GLOUD	9.530e-41	82.22	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A421GKL1_9STRA	1.110e-40	81.11	Uncharacterized protein n=1 Tax=Phytophthora kerno...	[more]
A0A485LIM5_9STRA	1.890e-40	81.11	Aste57867_21593 protein n=4 Tax=Aphanomyces TaxID=...	[more]
D0NSN0_PHYIT	2.310e-40	81.11	Importin subunit alpha, putative n=13 Tax=Peronosp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 22..62 e-value: 3.8E-8 score: 43.1
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 23..62 e-value: 2.3E-12 score: 46.5
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 33..75 score: 9.292
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..90 e-value: 7.2E-32 score: 112.3
None	No IPR available	PANTHER	PTHR23316	IMPORTIN ALPHA	coord: 4..85
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 2..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig64588	contig	Ecto-sp13_S_contig64588:22..668 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig64588.17231.1	mRNA_Ecto-sp13_S_contig64588.17231.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig64588 22..668 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig64588.17231.1 ID=prot_Ecto-sp13_S_contig64588.17231.1|Name=mRNA_Ecto-sp13_S_contig64588.17231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
SSWRVTKPALRTIGNIVCAEDDTDYTQHIIDAGAVPCLQQLIAHSNREIQ
KEACWTLSNIAAGTVEQIQTVLDSGALPSLVELASSQCLD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000225	Armadillo
IPR011989	ARM-like
IPR016024	ARM-type_fold