prot_Ecto-sp13_S_contig645.17217.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig645.17217.1
Unique Nameprot_Ecto-sp13_S_contig645.17217.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length195
Homology
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 2.170e-123
Identity = 189/194 (97.42%), Postives = 191/194 (98.45%), Query Frame = 0
Query:    1 MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEAAAKPPPAR 194
            MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDV+DTSRYDLQPPQGAAAEDEAAWKRALDN RAQTEHQHN RLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAE+TLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEA AKPPPAR
Sbjct:   35 MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHN-RLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEAVAKPPPAR 227          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.370e-39
Identity = 83/184 (45.11%), Postives = 118/184 (64.13%), Query Frame = 0
Query:    2 KEIVHSLIEEEMAAFEPPDYLADKPLPTTRF---KSPLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLK 182
            +E+VH LIEEEMA F P +YL D+ +        K  +L +E ARV    P+  +D +RY+++ P GA AED  AW+ A+ N +AQ  HQ+N R LNLELL NYGA+ WL HNKA  G E+ + +  KR R+EA+ +N +R+ +Q    + LW+L R+R E  DKN+QI LA   L+ ++K+ K
Sbjct:   24 QEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYN-RQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYK 206          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A5J4YGH3_9CHLO (Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGH3_9CHLO)

HSP 1 Score: 114 bits (284), Expect = 1.290e-27
Identity = 72/178 (40.45%), Postives = 112/178 (62.92%), Query Frame = 0
Query:    8 LIEEEMAAF--EPPDYLAD-KPLPTTRFKS-PLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRL 181
            LI+EE+     +P DYLA   PLP +RF+  P+L+ E+ARV+A K ++ MDTSR+ L PP  +   D +AW+ A DN  +Q EHQ+N RLLNLELL  +G +    HNK+ EG    +  + ++ +++ + +N +RK SQE+  R L  + ++ +    KN++I +AC+ L +EV  L
Sbjct:   40 LIKEELKKSNKKPSDYLASFPPLPASRFEGHPILQHEFARVKAGKQMEAMDTSRFHLTPPPASKQNDFSAWRAATDNAHSQLEHQYN-RLLNLELLLRFGPNARRVHNKSLEGQVHRLEKEIEQLQQQKDSINRQRKLSQESDGRALQQMEQQYTALVAKNMEINMACQELESEVSEL 216          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A1C7N7I1_9FUNG (Pre-mRNA-splicing factor SPF27 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N7I1_9FUNG)

HSP 1 Score: 100 bits (248), Expect = 9.680e-23
Identity = 69/183 (37.70%), Postives = 103/183 (56.28%), Query Frame = 0
Query:    1 MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRF-KSPLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLK 182
            +K  V  +IE+EM   +  +  +  PL    F K+ LLK E  RV  ++PLDV+DT RY+LQ P+     D   WK A++N ++Q E Q  S + NLELLQ YGA+ W  HN   E     +    ++ R++   VN +RK  Q  A  +L +L  K S+   +N+Q+++AC  L AEV+ L+
Sbjct:   31 LKTQVERMIEQEMRRMKRTER-SSLPLTANLFEKNSLLKQELERVEKKEPLDVLDTKRYELQGPEDE--NDIEGWKAAVNNTKSQLESQAGS-MFNLELLQKYGANAWRVHNYQLEADLKTIQRNTEQVRQQILEVNRERKQDQTQAAASLQSLENKWSDLISQNLQVEIACAALEAEVQELR 209          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A1Y1W5F2_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W5F2_9FUNG)

HSP 1 Score: 98.6 bits (244), Expect = 3.220e-22
Identity = 72/184 (39.13%), Postives = 102/184 (55.43%), Query Frame = 0
Query:    1 MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKS-PLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKA 183
            M++ V SLI++EM    PP      P  TT FK+  LL+ E+ RVRA KPL   D  RY L+ P+ +  +    W+ A +N  AQ EHQ N RL+NLELLQ +GA+ W   N  +EG    +     R R+E   VN  RK  Q  A   L ++  + +EG  K ++IQ+A   L+ E+ +L+A
Sbjct:   23 MRDQVSSLIQKEMGRMSPPLL----PKSTTLFKNNDLLRKEYERVRAGKPLPEFDIERYKLEAPEDS--DSVGIWRSAAENAAAQLEHQ-NIRLVNLELLQQFGANSWKLSNYQKEGLLRNIEKATDRHRDEGINVNKARKYEQTEAGIRLRDIEERWTEGVKKCIEIQVASSELKGEIAQLEA 199          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A168QXJ6_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168QXJ6_ABSGL)

HSP 1 Score: 98.2 bits (243), Expect = 6.640e-22
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 0
Query:    1 MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKS-PLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLK 182
            MK  V  LIE+EM   +  +  +  PL    F++ P+L  EWARV  + PL  +D +RY+LQ P+     D  AWK+A+DN +AQ E Q  S + NLELLQ YG + W  HN   E     +  + +R R E   +N +RK  Q  A   +  L  K S+   +N+Q+ + C  L +EV+ L+
Sbjct:   36 MKASVDRLIEQEMRRMKRKER-STLPLSIDLFQNDPVLSQEWARVSKQTPLTALDETRYELQGPESETDVD--AWKKAVDNTKAQLESQAGS-MFNLELLQKYGPNAWPVHNFQLEAYLKQIKQETERYRNEINEINRERKYDQTQAAAAIQALENKWSDLISQNLQVGVGCAALESEVEELR 214          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A9SH09_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SH09_PHYPA)

HSP 1 Score: 98.6 bits (244), Expect = 7.680e-22
Identity = 73/186 (39.25%), Postives = 107/186 (57.53%), Query Frame = 0
Query:    1 MKEIVHSLIEEEM--AAFEPPDYLAD-KPLPTTRFKS-PLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLK 182
            +K  V  +I EEM  ++ +P D+LA+  P+P+   +  P+L  E+ RVRA K    +D SRY L+PP      D  AWK A+ N +AQ +HQ   RL NLEL+ NYG + W+ HN+  E  +A +   A   + E E +N +RK +Q+AA   L  L+ +  E   KN+ I+ AC  L AEV +L+
Sbjct:   47 VKAEVDKMIAEEMRLSSKKPSDFLAELPPVPSINAQDHPMLAKEFDRVRAGKAPVALDLSRYGLEPPPVNKRNDVGAWKSAVQNAKAQLQHQ-TLRLENLELMLNYGTTAWIVHNQHLEAFQARLRDTALEYQREIEILNRERKLNQQAAAVELNLLSSQWKEISQKNLDIEEACLKLEAEVLKLR 231          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A0C3MLB6_9AGAM (Uncharacterized protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3MLB6_9AGAM)

HSP 1 Score: 97.8 bits (242), Expect = 7.980e-22
Identity = 76/192 (39.58%), Postives = 105/192 (54.69%), Query Frame = 0
Query:    1 MKEIVHSLIEEEMAAFEPPDYLADKPLPTTR--FK-SPLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAK---RAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEA 186
            ++ +V + I  E+ A  PP+   D  LP  R  FK +PLL  E  RV A++PL  +DT+RY L PP    A  EA W++A+DN RAQ EHQ  +R LNL LLQ YG + W  HN     TEAAV    K   R +++   VN  RK SQ  A   L +L  +  E     +Q++LA   +  E++ L+  +A
Sbjct:   25 LQALVDAEIARELKAKPPPNPATDPRLPPERPLFKDNPLLADELKRVAAKQPLSALDTTRYKLPPPPTDPAS-EADWQKAVDNARAQLEHQ-KTRQLNLSLLQTYGPNAWRVHNYL---TEAAVVQYEKALERLQDQVTEVNRSRKNSQNQAGNQLSSLENRWKELISAVLQLELANVAMEGEIEDLRRRDA 211          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: E4X7T6_OIKDI (Pre-mRNA-splicing factor SPF27 n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4X7T6_OIKDI)

HSP 1 Score: 96.7 bits (239), Expect = 2.160e-21
Identity = 65/185 (35.14%), Postives = 106/185 (57.30%), Query Frame = 0
Query:    1 MKEIVHSLIEEEMAAFEPP-DYLADKPLPT-TRFKSPLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKA 183
            ++E    LIE+EM  F P  +YL   P P   +F +PLLK+E AR++A+KP+++M T RY L  P      D  AW +A++N +AQ +HQ   R+ NLEL+ +YG+  WL +N+      +   ++ ++ R++ + VN +RK +Q+ A +TL  L  + +    KN +I+     L  E   +KA
Sbjct:   22 VREAAIELIEKEMHKFPPTKNYLEHLPAPDHDKFLTPLLKAEIARIKAKKPMELMQTERYTLPAPTPGLRHDPEAWNKAVENSKAQLQHQL-VRIENLELMSDYGSQAWLKYNETLNQMVSDAQNKLQQLRKDIQEVNWQRKDTQQRAGQTLARLENEWATLVHKNYEIEEVLIKLENEKNNMKA 205          
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Match: A0A2P6MMT5_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MMT5_9EUKA)

HSP 1 Score: 96.7 bits (239), Expect = 2.470e-21
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 0
Query:    5 VHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKA 183
            ++ +I +E   F P DYL+   +    F S ++  E  R+      + +D SRY+L PP  +   D+ AW+RAL N ++Q EHQ + RLLNLEL+  YGA+ ++ +NK  E  +  + ++ +  +++ E ++L+R+  Q      L  L  KR +   KN+ ++  C GL  E++ LKA
Sbjct:   29 INEMIAKEQRRFRPEDYLSKYEVIVDPFSSTMVNCEHERIANGMEPETLDVSRYELLPPSESKQNDKEAWERALHNAQSQLEHQ-SLRLLNLELMNKYGANAYIVYNKYLEDIQKRLQNEVQGMQKQIEDMSLERRNEQVFCGENLRTLESKRVDLIYKNLDLEEICRGLEEEIEALKA 206          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig645.17217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2U2_9PHAE2.170e-12397.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMV2_9STRA4.370e-3945.11Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema m... [more]
A0A5J4YGH3_9CHLO1.290e-2740.45Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Tre... [more]
A0A1C7N7I1_9FUNG9.680e-2337.70Pre-mRNA-splicing factor SPF27 n=1 Tax=Choanephora... [more]
A0A1Y1W5F2_9FUNG3.220e-2239.13Breast carcinoma amplified sequence 2 n=2 Tax=Lind... [more]
A0A168QXJ6_ABSGL6.640e-2237.16Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
A9SH09_PHYPA7.680e-2239.25Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A0C3MLB6_9AGAM7.980e-2239.58Uncharacterized protein n=1 Tax=Tulasnella calospo... [more]
E4X7T6_OIKDI2.160e-2135.14Pre-mRNA-splicing factor SPF27 n=2 Tax=Oikopleura ... [more]
A0A2P6MMT5_9EUKA2.470e-2132.96Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..145
NoneNo IPR availablePANTHERPTHR13296:SF0PRE-MRNA-SPLICING FACTOR SPF27coord: 2..184
IPR008409Pre-mRNA-splicing factor SPF27PFAMPF05700BCAS2coord: 2..186
e-value: 6.5E-47
score: 159.9
IPR008409Pre-mRNA-splicing factor SPF27PANTHERPTHR13296BCAS2 PROTEINcoord: 2..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig645contigEcto-sp13_S_contig645:3333..6236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig645.17217.1mRNA_Ecto-sp13_S_contig645.17217.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig645 2455..6292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig645.17217.1 ID=prot_Ecto-sp13_S_contig645.17217.1|Name=mRNA_Ecto-sp13_S_contig645.17217.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPL
DVMDTSRYDLQPPQGAAAEDEAAWKRALDNVRAQTEHQHNSRLLNLELLQ
NYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAERTL
WNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEAAAKPPPAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008409SPF27