prot_Ecto-sp13_S_contig644.17202.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig644.17202.1
Unique Nameprot_Ecto-sp13_S_contig644.17202.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length299
Homology
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BLAST of mRNA_Ecto-sp13_S_contig644.17202.1 vs. uniprot
Match: UPI0000161E5A (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E5A)

HSP 1 Score: 282 bits (722), Expect = 5.640e-91
Identity = 202/331 (61.03%), Postives = 224/331 (67.67%), Query Frame = 0 
Query:    1 MGDWCGDLLDDFLVLDSG-----------SLDMPEAFGTTAEDTAIPGPSFDDVFDINNLSGFDDNDGGAMPREPSSLAVAG-SGAAGXXXXXXXXXXXXXXXXXXXXXXA--------AARGGQGVAEKPPSLLAAGLGAXXXXAEGDNQTSS-------SSSPHGFDDDDTERDVVHTSDGDMSVSDGGWCSIVGSNDGEGPDTSESSYVPSADSSSTRPDDV----SEMSIGSCKEQ-DDETPCMNKPIGMMLAKPDPDDAEGDFICSKVRQRYEEAAHASGK-SEVFEVVFKDGSKTEYGGEEFMLYKQAYDENEGGRGCFEFSFKV 298
            M D C DLLD FL +DSG           +LD PEAFGTTAEDTA+PGP F DVFD +++SG   + GGAM  +PSSLAV G SGA  XXXXXXXXXXXXXXXXXX             AA  GQ VAEKP SL+AAG GA    A               S +  GF DDDTE+DVVHTSDG+M  SDG W SI+GS DGEGPD S SS +PS+DS            SEMSI SC+EQ DDE PC+ KPIG+MLA PDPDDA+GDFICSKVRQRY +A H  GK SEVFEVVFKDGSK EYG EE +LYK+ YDENEG RGCFEF FKV
Sbjct:    1 MDDGCKDLLDLFLDIDSGCDFGLASQSLGNLDTPEAFGTTAEDTAMPGP-FSDVFDFDDMSGSGHDGGGAMSHQPSSLAVTGGSGAVXXXXXXXXXXXXXXXXXXXKASDEVTASGEADAAHWGQPVAEKPSSLVAAGFGAAGGGAXXXXXXXXXXXXXXXSQASCGFIDDDTEKDVVHTSDGNMGGSDGNWSSIIGSIDGEGPDASASSCIPSSDSXXXXXXXXXXXXSEMSIVSCQEQEDDEDPCIEKPIGLMLATPDPDDADGDFICSKVRQRYVKAGHTPGKESEVFEVVFKDGSKKEYGREEVLLYKRIYDENEGERGCFEFFFKV 330
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig644.17202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0000161E5A5.640e-9161.03hypothetical protein n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig644contigEcto-sp13_S_contig644:8760..9656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig644.17202.1mRNA_Ecto-sp13_S_contig644.17202.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig644 8760..9656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig644.17202.1 ID=prot_Ecto-sp13_S_contig644.17202.1|Name=mRNA_Ecto-sp13_S_contig644.17202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=299bp
MGDWCGDLLDDFLVLDSGSLDMPEAFGTTAEDTAIPGPSFDDVFDINNLS
GFDDNDGGAMPREPSSLAVAGSGAAGSSGAAAAPGAVTAPGAVTAPGEAA
ARGGQGVAEKPPSLLAAGLGAAGGGAEGDNQTSSSSSPHGFDDDDTERDV
VHTSDGDMSVSDGGWCSIVGSNDGEGPDTSESSYVPSADSSSTRPDDVSE
MSIGSCKEQDDETPCMNKPIGMMLAKPDPDDAEGDFICSKVRQRYEEAAH
ASGKSEVFEVVFKDGSKTEYGGEEFMLYKQAYDENEGGRGCFEFSFKV*
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