prot_Ecto-sp13_S_contig6438.17199.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: D7G284_ECTSI (50S ribosomal protein L20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G284_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 9.080e-21 Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 0
Query: 63 MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRK +K
Sbjct: 1 MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKNKK 48
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: W7TQD2_9STRA (50s ribosomal protein l20 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQD2_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.390e-14 Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 0
Query: 18 SLVRPGCSSVARHRGGGLGAAVGGSSGSPQWPCDALGQHQQQCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
SLV ++VA R G AV G G PC G Q R +A NHRHKKI+K+AKGYRGR+ + F+IA+QRVEKALQ AYRDRK +K
Sbjct: 8 SLVLRRAATVATIRAGSQPDAVYG--GIASIPCLLKGPFLQPSRSLA--NHRHKKIVKMAKGYRGRT-NCFRIAVQRVEKALQYAYRDRKVKK 95
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: A0A2S6SQA5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha6_Bin1 TaxID=2013088 RepID=A0A2S6SQA5_9PROT) HSP 1 Score: 70.5 bits (171), Expect = 2.620e-13 Identity = 34/42 (80.95%), Postives = 40/42 (95.24%), Query Frame = 0
Query: 69 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
RHKKILK+AKGYRGRSK+VF++AIQRVEKALQ AYRDR+ +K
Sbjct: 13 RHKKILKMAKGYRGRSKNVFRVAIQRVEKALQYAYRDRRTKK 54
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: UPI001A15A6C6 (50S ribosomal protein L20 n=1 Tax=Rickettsia sp. TaxID=789 RepID=UPI001A15A6C6) HSP 1 Score: 69.7 bits (169), Expect = 4.310e-13 Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 0
Query: 59 QCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
+ R + RHKKILKL+KGYRGRSK+ F+IAIQ+VEKALQ AYRDR+A+K
Sbjct: 3 RARSGVVSKRRHKKILKLSKGYRGRSKNCFRIAIQKVEKALQYAYRDRRAKK 54
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: K2EJ18_9BACT (50S ribosomal protein L20 n=3 Tax=Bacteria TaxID=2 RepID=K2EJ18_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 4.990e-13 Identity = 34/42 (80.95%), Postives = 39/42 (92.86%), Query Frame = 0
Query: 69 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
RHKK+LKLAKGYRGRSKS ++IA+QRVEKALQ AYRDR+ RK
Sbjct: 13 RHKKVLKLAKGYRGRSKSCYRIALQRVEKALQYAYRDRRTRK 54
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: A0A1M3GWJ7_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium 41-28 TaxID=1895706 RepID=A0A1M3GWJ7_9PROT) HSP 1 Score: 69.7 bits (169), Expect = 4.990e-13 Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 0
Query: 69 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
RHKK+LKLAKGYRGRSK+ F+IAIQRVEKALQ AYRDR+ RK
Sbjct: 13 RHKKVLKLAKGYRGRSKNCFRIAIQRVEKALQYAYRDRRNRK 54
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: RL20_ORITI (50S ribosomal protein L20 n=11 Tax=Orientia TaxID=69474 RepID=RL20_ORITI) HSP 1 Score: 69.3 bits (168), Expect = 7.400e-13 Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 0
Query: 66 NNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
N +RHKKILKLAKGYRGR+K+ F+IAIQ+VEKALQ +YRDR+ RK
Sbjct: 10 NKNRHKKILKLAKGYRGRAKNCFRIAIQKVEKALQYSYRDRRNRK 54
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: A0A6M8VXV0_9PROT (50S ribosomal protein L20 n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A6M8VXV0_9PROT) HSP 1 Score: 68.6 bits (166), Expect = 1.440e-12 Identity = 32/42 (76.19%), Postives = 39/42 (92.86%), Query Frame = 0
Query: 69 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
RHKK++K+AKGYRGRSK+ F+IA+QRVEKALQ AYRDR+ RK
Sbjct: 13 RHKKVIKMAKGYRGRSKNCFRIAVQRVEKALQYAYRDRRVRK 54
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: A0A4P5SLS5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A4P5SLS5_9PROT) HSP 1 Score: 68.2 bits (165), Expect = 1.990e-12 Identity = 33/42 (78.57%), Postives = 40/42 (95.24%), Query Frame = 0
Query: 69 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
RHKKILKLAKGYRGR+K+ F++AI++VEKAL+ AYRDRKARK
Sbjct: 13 RHKKILKLAKGYRGRAKNCFRVAIEKVEKALRYAYRDRKARK 54
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Match: A0A2E6VYR4_9PROT (50S ribosomal protein L20 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E6VYR4_9PROT) HSP 1 Score: 68.2 bits (165), Expect = 2.090e-12 Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 0
Query: 69 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARK 110
RHKKILK+AKGYRGRSKS F+IAI+RVEK LQ AYRDR+ RK
Sbjct: 13 RHKKILKMAKGYRGRSKSSFRIAIERVEKGLQYAYRDRRVRK 54 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6438.17199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig6438.17199.1 ID=prot_Ecto-sp13_S_contig6438.17199.1|Name=mRNA_Ecto-sp13_S_contig6438.17199.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bpback to top |