prot_Ecto-sp13_S_contig64064.17172.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig64064.17172.1
Unique Nameprot_Ecto-sp13_S_contig64064.17172.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
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BLAST of mRNA_Ecto-sp13_S_contig64064.17172.1 vs. uniprot
Match: D7FYQ8_ECTSI (DUF4821 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ8_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 3.280e-134
Identity = 216/229 (94.32%), Postives = 218/229 (95.20%), Query Frame = 0 
Query:    1 PQKFRKLFGSYNFGQMIETSYLAVSALSTLDPKPGGGGDVHLPGNRQHQQPETLVGFAILSDSPRAGISEDWLEWFSETHAPADAEVTMTNTLWMDFAVAVSAARASGVVSGVAVGREEEGXXXXXXXXXXXXXXXXXAGIIEDIVRTVFNTLPEIDYLVISLPGDTSTGGKGSKNGAGTACIPTPAYLLRAFEGLSRHADASPNNLDEAYGTPRLLLCDRMAFLPTLA 229
            P  FRKLFGSYNFGQMIETSYL+VSALSTLDP P GGGDVHLPGNRQ Q PE LVGFAILSDSPRAGISEDWLEWFSETHAPADAEVTMTNTLWMDFAVAVSAARASGVVSGVAVGREEEGXXXXXXXXXXXXXXXX AGI+EDIVRTVFNTLPEIDYLVISLPGDTSTGGKGSK GAGTA IPTPAYLLRAFE LSRHADASPNNLDEAYGTPRLLLCDRMAFLPTLA
Sbjct:   26 PSMFRKLFGSYNFGQMIETSYLSVSALSTLDPNPAGGGDVHLPGNRQQQHPEFLVGFAILSDSPRAGISEDWLEWFSETHAPADAEVTMTNTLWMDFAVAVSAARASGVVSGVAVGREEEGXXXXXXXXXXXXXXXXAAGILEDIVRTVFNTLPEIDYLVISLPGDTSTGGKGSKKGAGTASIPTPAYLLRAFEVLSRHADASPNNLDEAYGTPRLLLCDRMAFLPTLA 254
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BLAST of mRNA_Ecto-sp13_S_contig64064.17172.1 vs. uniprot
Match: A0A6H5JFL7_9PHAE (DUF4821 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL7_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 3.230e-119
Identity = 181/214 (84.58%), Postives = 187/214 (87.38%), Query Frame = 0 
Query:   16 MIETSYLAVSALSTLDPKPGGGGDVHLPGNRQHQQPETLVGFAILSDSPRAGISEDWLEWFSETHAPADAEVTMTNTLWMDFAVAVSAARASGVVSGVAVGREEEGXXXXXXXXXXXXXXXXXAGIIEDIVRTVFNTLPEIDYLVISLPGDTSTGGKGSKNGAGTACIPTPAYLLRAFEGLSRHADASPNNLDEAYGTPRLLLCDRMAFLPTLA 229
            MIETSYL+VSALST DP PGGGGDVHL GNRQ QQP+ LVGFAILSDSPRAG+SEDWLEWFSETHAPADAEVTMTNTLWMDFAVAVSAARASGVVSGVAVGREE G                 AGI+EDIVRTVFNTLPEIDYLV+SLPGDTSTGGKGSK GAGTA IPTP YLLRAF+ LSRHADASPNNLDEAYGTPRLLLCDRMAFLPTLA
Sbjct:    1 MIETSYLSVSALSTPDPNPGGGGDVHLLGNRQQQQPDILVGFAILSDSPRAGLSEDWLEWFSETHAPADAEVTMTNTLWMDFAVAVSAARASGVVSGVAVGREEVGDNNAVACRGEEAEEEEAAGILEDIVRTVFNTLPEIDYLVMSLPGDTSTGGKGSKKGAGTASIPTPGYLLRAFQVLSRHADASPNNLDEAYGTPRLLLCDRMAFLPTLA 214
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BLAST of mRNA_Ecto-sp13_S_contig64064.17172.1 vs. uniprot
Match: A0A835ZCT4_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.180e-17
Identity = 46/99 (46.46%), Postives = 57/99 (57.58%), Query Frame = 0 
Query:    1 PQKFRKLFGSYNFGQMIETSYLAVSALSTLDPKPGGGGDVHLPGNRQHQQPETLVGFAILSDSPRAGISEDWLEWFSETHAPADAEVTMTNTLWMDFAV 99
            P  +RKLFGSYNF  MIE  YL + AL                        E + GF  LSD+PRAG +E+WL WF+ET+APADA+    NTLW++FAV
Sbjct:   42 PGMYRKLFGSYNFASMIECGYLCLIALVG----------------------EEIAGFLSLSDAPRAGGAEEWLAWFAETYAPADADARPANTLWVEFAV 118
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig64064.17172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYQ8_ECTSI3.280e-13494.32DUF4821 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JFL7_9PHAE3.230e-11984.58DUF4821 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZCT4_9STRA6.180e-1746.46AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032151Cilia- and flagella-associated protein 61, N-terminal domainPFAMPF16092DUF4821coord: 5..105
e-value: 4.0E-10
score: 39.8
IPR038884Cilia- and flagella-associated protein 61PANTHERPTHR21178FAMILY NOT NAMEDcoord: 5..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig64064contigEcto-sp13_S_contig64064:86..772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig64064.17172.1mRNA_Ecto-sp13_S_contig64064.17172.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig64064 86..772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig64064.17172.1 ID=prot_Ecto-sp13_S_contig64064.17172.1|Name=mRNA_Ecto-sp13_S_contig64064.17172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
PQKFRKLFGSYNFGQMIETSYLAVSALSTLDPKPGGGGDVHLPGNRQHQQ
PETLVGFAILSDSPRAGISEDWLEWFSETHAPADAEVTMTNTLWMDFAVA
VSAARASGVVSGVAVGREEEGDNNAAARRGEEAEEEEAAGIIEDIVRTVF
NTLPEIDYLVISLPGDTSTGGKGSKNGAGTACIPTPAYLLRAFEGLSRHA
DASPNNLDEAYGTPRLLLCDRMAFLPTLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032151CFAP61_N
IPR038884CFAP61