prot_Ecto-sp13_S_contig6405.17169.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6405.17169.1
Unique Nameprot_Ecto-sp13_S_contig6405.17169.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length420
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6405.17169.1 vs. uniprot
Match: A0A6H5JNI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI7_9PHAE)

HSP 1 Score: 597 bits (1540), Expect = 1.720e-204
Identity = 379/429 (88.34%), Postives = 390/429 (90.91%), Query Frame = 0 
Query:    1 MRARRSADAILGAAQSPAISELDKSPPALAMSTDMVPLTVVDSGSPVLLQGGGSQPQTESM----------LQQQXXXXXXXXXXXXXXXXXNEPSGEGAXXXXXXXXXXXXXXXXXXXXXTGGTMLSSPPAEVDSDTASEGGEGGAPVNSHFVVTPAITRAAAATVATAPPVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKKLLATMLQDAKVQAGELDVVHGMSSPAITRSNLSGAAXXXXXXXXXXXVTRANLHTTALLMSGKEEREKASKNASNSAVRNVGYSGRDISSKVAERWGATLLLHRVKRARAVDSSPLGPREVAAAPGDISVMPITTASSQRRQLWALAIRENELRHERMKEDSRSEYDVRQKELVSWMVDEEAGRHDHLDGTAGPPPPVWLDTDR 419
            MRARRSADAILG AQSP +SELD+SPPA AM TD+VPLTVVDSGSPVLL+GGGSQ QTE+M              XXXXXXXXXXXXXXXXXNEPSGEGA   XXX  XXXXXXXXXXXXXTGGTMLSSPPAEVD DTASEGG+GGAP  SH VVTPAITR  A TVATAPPVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALK LLATMLQDAKVQAGELDVVHGMSSPAITRSNLSGAAXXXXXXXXXX VTRANLHTTALL+SGKEEREKAS++ SNSAVRNVGYSGRDI +KVAERWGATLLLHRVKRA+AVD SPLGP EVAAAPGDISVMPIT ASSQRRQLWALAIRENELRHERMKED RSEYDVRQKELVSWMVDEEAGRHDHLDGTAGPPPPVWLDTDR
Sbjct:  499 MRARRSADAILGTAQSPGVSELDESPPAPAMPTDVVPLTVVDSGSPVLLEGGGSQTQTEAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPSGEGAVAAXXXEMXXXXXXXXXXXXXTGGTMLSSPPAEVDLDTASEGGDGGAPAISHLVVTPAITRGTAPTVATAPPVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKTLLATMLQDAKVQAGELDVVHGMSSPAITRSNLSGAAXXXXXXXXXXVVTRANLHTTALLVSGKEEREKASRSNSNSAVRNVGYSGRDIGTKVAERWGATLLLHRVKRAKAVDYSPLGPCEVAAAPGDISVMPITKASSQRRQLWALAIRENELRHERMKEDGRSEYDVRQKELVSWMVDEEAGRHDHLDGTAGPPPPVWLDTDR 927
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BLAST of mRNA_Ecto-sp13_S_contig6405.17169.1 vs. uniprot
Match: D8LTH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH9_ECTSI)

HSP 1 Score: 515 bits (1326), Expect = 6.750e-181
Identity = 288/304 (94.74%), Postives = 293/304 (96.38%), Query Frame = 0 
Query:  116 MLSSPPAEVDSDTASEGGEGGAPVNSHFVVTPAITRAAAATVATAPPVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKKLLATMLQDAKVQAGELDVVHGMSSPAITRSNLSGAAXXXXXXXXXXXVTRANLHTTALLMSGKEEREKASKNASNSAVRNVGYSGRDISSKVAERWGATLLLHRVKRARAVDSSPLGPREVAAAPGDISVMPITTASSQRRQLWALAIRENELRHERMKEDSRSEYDVRQKELVSWMVDEEAGRHDHLDGTAGPPPPVWLDTDR 419
            MLSSPPAEVDSDT SEGG+ GAP NSH VVTPAITRAAAATVATAP VGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKKLLATMLQDAKVQAGELDVVHGMS PAITRSNLSGAAXXXXXXXXXXXVTRANLHTTALL+SGKEEREKASK+ SNSAVRNVGYSGRDI SKVAERWGATLLLHRVKRARA DSSPLGP  VAAAPGDISV+PITTASSQRRQLWALAIRENELRHERMKEDSRSEYDVRQKEL+SWMVDEEAGRHDHLDGTAGPPPPVWLDTDR
Sbjct:    1 MLSSPPAEVDSDTVSEGGDIGAPANSHLVVTPAITRAAAATVATAPTVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKKLLATMLQDAKVQAGELDVVHGMSGPAITRSNLSGAAXXXXXXXXXXXVTRANLHTTALLVSGKEEREKASKSTSNSAVRNVGYSGRDIGSKVAERWGATLLLHRVKRARAADSSPLGPCGVAAAPGDISVVPITTASSQRRQLWALAIRENELRHERMKEDSRSEYDVRQKELLSWMVDEEAGRHDHLDGTAGPPPPVWLDTDR 304
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6405.17169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNI7_9PHAE1.720e-20488.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH9_ECTSI6.750e-18194.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6405contigEcto-sp13_S_contig6405:6485..7744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6405.17169.1mRNA_Ecto-sp13_S_contig6405.17169.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6405 6449..7867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6405.17169.1 ID=prot_Ecto-sp13_S_contig6405.17169.1|Name=mRNA_Ecto-sp13_S_contig6405.17169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=420bp
MRARRSADAILGAAQSPAISELDKSPPALAMSTDMVPLTVVDSGSPVLLQ
GGGSQPQTESMLQQQQQQQQQEKQQQQQQQQENEPSGEGAEAAAAAEMAE
LAELADLAEAATGGTMLSSPPAEVDSDTASEGGEGGAPVNSHFVVTPAIT
RAAAATVATAPPVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTAS
ELRRARQTKAAALKKLLATMLQDAKVQAGELDVVHGMSSPAITRSNLSGA
AAAAAAAEAAAVVTRANLHTTALLMSGKEEREKASKNASNSAVRNVGYSG
RDISSKVAERWGATLLLHRVKRARAVDSSPLGPREVAAAPGDISVMPITT
ASSQRRQLWALAIRENELRHERMKEDSRSEYDVRQKELVSWMVDEEAGRH
DHLDGTAGPPPPVWLDTDR*
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