prot_Ecto-sp13_S_contig640.17164.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig640.17164.1
Unique Nameprot_Ecto-sp13_S_contig640.17164.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length574
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig640.17164.1 vs. uniprot
Match: D8LQU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU0_ECTSI)

HSP 1 Score: 615 bits (1586), Expect = 2.160e-214
Identity = 374/456 (82.02%), Postives = 391/456 (85.75%), Query Frame = 0 
Query:    1 MAKDMLEEHPEAHA-QSEFFCLEVYVADVESCSFSHTSVTPTVILSLLDFEPLVFDLS--PTAQRQARRKRGPGFREVPQWEEENDQHDGIGKVDSTNDTFRASSDSAQHDYYSFNNRKSKTTATTRGKHTTSDVENKNGQHDLKSFACSKGKSCIFTANPVGLSRALQTQSALTFLVASKLSQRQAAIHGSCAIDLSAFGPNTELSQSLPRAVSCWGYRSTCVESKDLKGATVARAGLTVSLSCLGATGSLIHFTPAWTEAAPYRASGDGSPSAVVPPRPDHYTPDRSTPGRLPVVHEQCTIEGARLDGQARGHAPVAKQPGTDHPMSRDTEAGSARCGDGTTKNCGSSAGGTSAGAECWTCEYNPRDGCLVGPTSSAAAVVEPTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVGPPGDSAGAEAYDNDDAETDTKTSPVR 453
            MAK+ LEEHP  H  QSEFFCLEVYVADVESCSF+HTSVTPTVILSLLDFEPLVFDLS  P AQRQAR KRGPG REV QWEE++DQH+GIG+V+STN+TFRASSD AQHD + FNNRKSKTTATT  KH  S  +N+NG    K F CSKGKSCIFTANP  LSRALQTQSALTFLVASKLS RQAAIHGSCAIDLS FGPN ELS SLPRAVSCWG+R+TCVESKDLKGATVARAGLTVSLSCLGATGSLIH TP  T  A YRASG+GSPSA  PPRPDH TPDRSTPG LPVV +Q T EG +LD QARGHAPVAKQPGTDH M R  EAGSAR GDG TK  GS AGGTSAGAECWTCEYNPRDG LVGPTSSAAA VEPTAAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AV GPPGDSAGAEA  NDDAETDT+TSP R
Sbjct:    1 MAKNRLEEHPLDHREQSEFFCLEVYVADVESCSFAHTSVTPTVILSLLDFEPLVFDLSRTPPAQRQARGKRGPGLREVSQWEEKDDQHNGIGRVESTNNTFRASSDGAQHDDHLFNNRKSKTTATTTVKHA-SYADNENGPCHPKPFFCSKGKSCIFTANPADLSRALQTQSALTFLVASKLSLRQAAIHGSCAIDLSTFGPNAELSHSLPRAVSCWGHRTTCVESKDLKGATVARAGLTVSLSCLGATGSLIHLTPVRTGVASYRASGNGSPSAAAPPRPDHSTPDRSTPGGLPVVSDQWTTEGTQLDAQARGHAPVAKQPGTDHLMCRHAEAGSARYGDGRTKESGSGAGGTSAGAECWTCEYNPRDGRLVGPTSSAAAAVEPTAAATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGGPPGDSAGAEADGNDDAETDTETSPTR 455
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig640.17164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQU0_ECTSI2.160e-21482.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig640contigEcto-sp13_S_contig640:19590..23062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig640.17164.1mRNA_Ecto-sp13_S_contig640.17164.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig640 19590..23062 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig640.17164.1 ID=prot_Ecto-sp13_S_contig640.17164.1|Name=mRNA_Ecto-sp13_S_contig640.17164.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=574bp
MAKDMLEEHPEAHAQSEFFCLEVYVADVESCSFSHTSVTPTVILSLLDFE
PLVFDLSPTAQRQARRKRGPGFREVPQWEEENDQHDGIGKVDSTNDTFRA
SSDSAQHDYYSFNNRKSKTTATTRGKHTTSDVENKNGQHDLKSFACSKGK
SCIFTANPVGLSRALQTQSALTFLVASKLSQRQAAIHGSCAIDLSAFGPN
TELSQSLPRAVSCWGYRSTCVESKDLKGATVARAGLTVSLSCLGATGSLI
HFTPAWTEAAPYRASGDGSPSAVVPPRPDHYTPDRSTPGRLPVVHEQCTI
EGARLDGQARGHAPVAKQPGTDHPMSRDTEAGSARCGDGTTKNCGSSAGG
TSAGAECWTCEYNPRDGCLVGPTSSAAAVVEPTAAATAAGRDVSDAYLGP
KRGGAVSPGAPCHAVEEETGAAAAVVGPPGDSAGAEAYDNDDAETDTKTS
PVRLSVAASVSKIDWMGSPGSDSRLQETPLQTEGCCGLDEKGGGGKKPDE
IAATEEEGVAGAGQGRNKAARNFPGNNRLVTSWRPGAVPSHHEEGIVFDR
RAAAVPSATGAAPDRGGHRSATRR
back to top