prot_Ecto-sp13_S_contig6378.17136.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6378.17136.1
Unique Nameprot_Ecto-sp13_S_contig6378.17136.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length638
Homology
BLAST of mRNA_Ecto-sp13_S_contig6378.17136.1 vs. uniprot
Match: A0A6H5JHD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD9_9PHAE)

HSP 1 Score: 851 bits (2198), Expect = 7.980e-305
Identity = 528/639 (82.63%), Postives = 539/639 (84.35%), Query Frame = 0
Query:    1 MRRRVPKMEPTSVSKPRNSSCGSSRPAALKGISRPAGNTNTFQDLQASLVRAGMRRAGMPVAAAACFKAEPTSSIGRSGSEYPYVPPAAVSKQGRSSHAPSEASRKSGRAAASTRAAAAVPAKWVWGQGQXXXXXXXXXEEAQHHQQTLAPVAHDLGGDAAIKPVEPGNINVFRKKMFADSSSSSFESSCSTEAMTESTTSSPKDANWDAPFLSRLSDMSMMFPEPPTRPPGETTPSSSSRALTISGLGKNITSSLPSVQLLMPLRWRKRLRATGSNKRCRKSTSRWIARSKATNSMSEKSLLARALSMNDNGAHRGKEAAAAAAGAKPKLSSSCVVEPTAVATSPRRQGVSKVARETPTQLSKLPEVNEQQEEGERXXXXXXXXAHPACDPPSALPTPVPHPAEKSPPPAPLHTAPRPPAPQKQRYNVAALLAARHSSRLRRRDCFASSPSAAGTEDTXXXXXXSLSPPYMTVKNRLASSSSSIFEEDGDDNKKTLFLNPYSRSPLPPAAVAPRTGAAPAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LFATGAAVDGARRRAAVAALQVEANRQYGDRRRRMKDGESGIWLPSPGIWSSARRPTPLNADLFFAW 637
            M  RVPKMEPT ++KP NSS  SSR AALKG SRPAG TNTFQDLQASLVRAGMRRAGMP AA+AC KAEPTSS+GRSGSEYPYVPPAAVS QGRSSHAPSEA RKSGRA ASTRAAAAVPAKWVWGQGQ   XXX   EE Q H+QT APVAHDLGGDAA    +PGNI VFR KMFAD+SSSSFESSCSTEAMTESTTSSPKDANWDAPFLSRLSDMSMMFPEPPTR PG+T PSSSSR LTISGLGKNITSSLPSVQLLMPLRWRKRLRATGSNKRCRKSTSRWIARSKAT+SMSEKSLLARALSMNDNGAHRGKEAAA         SSS  VE TAV T PRR+GVSKV  ETP QLSKL EVNEQQE    XXXXXXXXAHPACDPPS LPTPVPHPAEKSPPPAPLHTAPRPPAPQKQRYN+AALLAARHSSRLRRRDCFASSPSAAGTE T      SLSPPYMTVKNRLASS        GDDNKKTLFLNPYSRSPLPPAAVA RTGAAPAAKA                         XXXXXXXXXXXXXXXXXXXXX  LFA GAAVDGARRRAAVAALQVEANRQYGDRRRRMKDGESGIWLPSPGIWSSARRPTPLNADLF AW
Sbjct:    1 MHHRVPKMEPTFLAKPHNSS-SSSRSAALKGTSRPAGITNTFQDLQASLVRAGMRRAGMPAAASACVKAEPTSSVGRSGSEYPYVPPAAVSTQGRSSHAPSEAPRKSGRAGASTRAAAAVPAKWVWGQGQEKEXXXEV-EEPQDHRQTFAPVAHDLGGDAASNSAQPGNIGVFRNKMFADASSSSFESSCSTEAMTESTTSSPKDANWDAPFLSRLSDMSMMFPEPPTRTPGKTMPSSSSRTLTISGLGKNITSSLPSVQLLMPLRWRKRLRATGSNKRCRKSTSRWIARSKATSSMSEKSLLARALSMNDNGAHRGKEAAAXXXXXXXXXSSSRAVESTAVMTPPRRRGVSKVVGETPLQLSKLSEVNEQQEXX-XXXXXXXXXAHPACDPPSELPTPVPHPAEKSPPPAPLHTAPRPPAPQKQRYNMAALLAARHSSRLRRRDCFASSPSAAGTEHTCFASSSSLSPPYMTVKNRLASSXXXXXXXXGDDNKKTLFLNPYSRSPLPPAAVA-RTGAAPAAKATAAKKNKPGATTHNPMSSSDSWVWGXXXXXXXXXXXXXXXXXXXXXHSLFAMGAAVDGARRRAAVAALQVEANRQYGDRRRRMKDGESGIWLPSPGIWSSARRPTPLNADLFSAW 635          
BLAST of mRNA_Ecto-sp13_S_contig6378.17136.1 vs. uniprot
Match: D7G1N1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N1_ECTSI)

HSP 1 Score: 777 bits (2006), Expect = 4.130e-277
Identity = 475/586 (81.06%), Postives = 486/586 (82.94%), Query Frame = 0
Query:   54 MRRAGMPVAAAACFKAEPTSSIGRSGSEYPYVPPAAVSKQGRSSHAPSEASRKSGRAAASTRAAAAVPAKWVWGQGQXXXXXXXXXE--EAQHHQQTLAPVAHDLGGDAAIKPVEPGNINVFRKKMFADSSSSSFESSCSTEAMTESTTSSPKDANWDAPFLSRLSDMSMMFPEPPTRPPGETTPSSSSRALTISGLGKNITSSLPSVQLLMPLRWRKRLRATGSNKRCRKSTSRWIARSKATNSMSEKSLLARALSMNDNGAHRGKEAAAAAAGAKPKLSSSCVVEPTAVATSPRRQGVSKVARETPTQLSKLPEVNEQQEEGERXXXXXXXXAHPACDPPSALPTPVPHPAEKSPPPAPLHTAPRPPAPQKQRYNVAALLAARHSSRLRRRDCFASSPSAAGTEDTXXXXXXSLSPPYMTVKNRLASSSSSIFEEDGDDNKKTLFLNPYSRSPLPPAAVAPRTGAAPAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFATGAAVDGARRRAAVAALQVEANRQYGDRRRRMKDGESGIWLPSPGIWSSARRPTPLNADLFFAW 637
            MRRAG+P AA    KA+PTSS+GR GSEYP VPPAAVSKQGRSSHAPSE SRKSGRAAAST AA AVPAKWV     XXXXXXXXX   EAQ HQQTL+PVAHDLGGDAA KP +P NI+V R KMFADSSSSSFESSCSTEAMTESTTSSPKDANWDAPFLSRLSDMSMMFPEPPTRPP ET PSSSSRALTISGLGKNITSSLPSVQLLMPLRWRKR RAT SNKRCRKSTSRWIARSKAT+SMSEKS LARALSMNDNGAHRGKEAAAA  GAKP + SSC VE TA  T PRR+GVSKVA ETP+QLSKL EVNE+Q     XXXXXXX A PA DPPSALPTPVPHPAEKSPPPAPLHTAPRPPAPQKQRYNVAALLAARHSSRLRRRDCFASSPSAAGTE TXXXXXXSLSPPYMTVKNRLASSSSSIFEEDGDDNKKTLFLNPYSRSPLPPAAVAPRT AAPAAKA                                                 TGAAVDGARRRAAVAALQVEANRQYGDRRRRMKDGESGIWLPSPGIWSSARRPTPLNADLF AW
Sbjct:    1 MRRAGVPGAAGCFSKAKPTSSVGRPGSEYPSVPPAAVSKQGRSSHAPSETSRKSGRAAASTTAAXAVPAKWVXXXXXXXXXXXXXXXXXEAQQHQQTLSPVAHDLGGDAASKPAQPANIDVLRTKMFADSSSSSFESSCSTEAMTESTTSSPKDANWDAPFLSRLSDMSMMFPEPPTRPPAETMPSSSSRALTISGLGKNITSSLPSVQLLMPLRWRKRFRATESNKRCRKSTSRWIARSKATSSMSEKSFLARALSMNDNGAHRGKEAAAAXXGAKP-MPSSCAVESTAATTPPRRRGVSKVAGETPSQLSKLSEVNERQ----XXXXXXXXEARPAFDPPSALPTPVPHPAEKSPPPAPLHTAPRPPAPQKQRYNVAALLAARHSSRLRRRDCFASSPSAAGTEGTXXXXXXSLSPPYMTVKNRLASSSSSIFEEDGDDNKKTLFLNPYSRSPLPPAAVAPRTAAAPAAKATAAQKNKPDA--------------------------------------TTGAAVDGARRRAAVAALQVEANRQYGDRRRRMKDGESGIWLPSPGIWSSARRPTPLNADLFSAW 543          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6378.17136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHD9_9PHAE7.980e-30582.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1N1_ECTSI4.130e-27781.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 365..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6378contigEcto-sp13_S_contig6378:3075..7246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6378.17136.1mRNA_Ecto-sp13_S_contig6378.17136.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6378 2..7443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6378.17136.1 ID=prot_Ecto-sp13_S_contig6378.17136.1|Name=mRNA_Ecto-sp13_S_contig6378.17136.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=638bp
MRRRVPKMEPTSVSKPRNSSCGSSRPAALKGISRPAGNTNTFQDLQASLV
RAGMRRAGMPVAAAACFKAEPTSSIGRSGSEYPYVPPAAVSKQGRSSHAP
SEASRKSGRAAASTRAAAAVPAKWVWGQGQEEEEEEEEVEEAQHHQQTLA
PVAHDLGGDAAIKPVEPGNINVFRKKMFADSSSSSFESSCSTEAMTESTT
SSPKDANWDAPFLSRLSDMSMMFPEPPTRPPGETTPSSSSRALTISGLGK
NITSSLPSVQLLMPLRWRKRLRATGSNKRCRKSTSRWIARSKATNSMSEK
SLLARALSMNDNGAHRGKEAAAAAAGAKPKLSSSCVVEPTAVATSPRRQG
VSKVARETPTQLSKLPEVNEQQEEGERQEEEAEQEAHPACDPPSALPTPV
PHPAEKSPPPAPLHTAPRPPAPQKQRYNVAALLAARHSSRLRRRDCFASS
PSAAGTEDTCFASSPSLSPPYMTVKNRLASSSSSIFEEDGDDNKKTLFLN
PYSRSPLPPAAVAPRTGAAPAAKATAAKQKKKPDATTHDPTSSSDSWVWG
GRSSHNRTNKQQQQQQQRHSLFATGAAVDGARRRAAVAALQVEANRQYGD
RRRRMKDGESGIWLPSPGIWSSARRPTPLNADLFFAW*
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