prot_Ecto-sp13_S_contig6353.17106.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6353.17106.1
Unique Nameprot_Ecto-sp13_S_contig6353.17106.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length168
Homology
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 1.680e-107
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0
Query:    1 MIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLTRKGAQAAASTYV 167
            MIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDL RKGAQAAASTYV
Sbjct:   55 MIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 221          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.400e-50
Identity = 90/163 (55.21%), Postives = 121/163 (74.23%), Query Frame = 0
Query:    5 RVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLTRKGAQAAASTYV 167
            R+ N+ LC +L+ATAVL+LIG   +    VLA YL AF+CILCCFETH+  +A   A+NFGFLYNAKGRA+FL+FVG+LCFS  S + +++G  M+ +++FNF+VI KYPE +   QRKDLES  RD++R N+GA+A+ GV FA+NNP      A+ A ST+V
Sbjct:    6 RLINMGLCVLLSATAVLELIGLP-NFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTA-STFV 165          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH)

HSP 1 Score: 127 bits (319), Expect = 4.780e-34
Identity = 67/135 (49.63%), Postives = 91/135 (67.41%), Query Frame = 0
Query:   34 VLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQ-------AGVEFARNNPDLTRKGAQA 161
            VLACY+  FSC+LCCFETHLK V+K IA NFGF+Y+AK R++F+IF+G + FS  S    + G  M+ NA FN + +F+YP++E D+QRKD +SE +DYL +N     Q       A  E  R NP++ R+G QA
Sbjct:   19 VLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSF-SLFGKIIGLCMLANAGFNLFAVFRYPQYE-DMQRKDAQSEIQDYLASNPAFAKQIVDAGLKASTEVLRQNPEIARQGTQA 151          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.580e-33
Identity = 81/156 (51.92%), Postives = 101/156 (64.74%), Query Frame = 0
Query:    2 IYMRVANIALCGILAATAVLKLI-GAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLTR 156
            IYMRVAN ALC +++A AVL +I  AG   A  VLA Y+ AFSC+LCCFE +L+ VAK IA NFGFLY+AK RA FLIFVGVLCFSL      VAGA M+ NA+FN  V+ KYP++  +      E E   +++ N G LA+ G         L+R
Sbjct:   84 IYMRVANFALCILMSAAAVLTVIVPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLGIT-GKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG-LARKGARGPHRRSSLSR 237          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A6U4HF89_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HF89_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.410e-27
Identity = 72/163 (44.17%), Postives = 101/163 (61.96%), Query Frame = 0
Query:    2 IYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPE-FERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLTRKGAQAAA 163
            +YMRV N+ L  ++ A A++KL+ A  D+A  V+  Y   FS ++CCFETH K VA  I  NFGF+Y+A GR  F+IFVG+LC+SL   I ++AGALM+VNA   FY+++KYP  F  +L+  + E+ G+   +A            A NNP+    GA AAA
Sbjct:   97 LYMRVVNVILTALICAAAIIKLL-ASPDLALGVICLYAFGFSVLICCFETHFKQVALLIQDNFGFMYDATGRFFFMIFVGILCWSLGI-IGYIAGALMIVNACVGFYIMYKYPHVFTEELESFE-ETMGKHAAQA------------AANNPEAVAAGAGAAA 244          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.360e-26
Identity = 70/179 (39.11%), Postives = 105/179 (58.66%), Query Frame = 0
Query:    1 MIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRD------------YLRANR---GALAQAGVEFARNNPDLTRKGAQAAAS 164
            ++YMR+AN+A+  +L  TA L        ++ AV+A Y+  F C++CCFETHLK V+  IA NFGF+YNAKGR +F+I +  LC +LN     + G LM   A++N YVI  +PE+  + Q  D + E  +            Y++ N     A+A AG ++A NNP++  +G QA A+
Sbjct:   92 LLYMRLANVAVA-VLMVTAALTTFITSSSLSTAVIALYISCFGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMILMATLCMTLNV-FGQITGGLMYGVALYNLYVICMHPEYGSETQELDRKGENPNSIQHVAQSYATGYVQNNPDQVAAVASAGAQWAYNNPEVAAQGVQAFAN 268          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.400e-24
Identity = 57/161 (35.40%), Postives = 96/161 (59.63%), Query Frame = 0
Query:    2 IYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLTRKGAQAA 162
            +YMR+AN+AL  ++  +AV   + +   ++  ++  Y+  F C+ CC+ETHLK V+  IA NFGFLYNAK R +F++ +  LC++LN  I  +   L +     N YV+FK+P ++  ++  DL  +G + ++      +Q  V +AR NPD  +  A++A
Sbjct:   92 LYMRLANVALSALMITSAVTSALMSA-SLSNFIIGAYVSCFGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMMLIATLCYTLNI-IGMITAFLCVAAVCLNVYVLFKHPHYQDQIKNDDLHGKGPETIQ---DMASQYAVSYARENPDQVQAAARSA 247          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A7S4EDS9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDS9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 6.090e-23
Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 0
Query:    2 IYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGAL-AQAGVEFARNNPDLTRKGAQAA 162
            I MR+ N+ +  ++AA A++KL+       G VL  Y+  F+ ++CCFETHL  V++ I  NFGFLYN KGR  F I V  LCFS+   I  ++G  ++V A +N YVI+K+P++ER++   D+E  G   +    G++ A  G     ++  L   GA AA
Sbjct:   88 ISMRLLNMGVSILMAAAAIIKLLSLPAFTKG-VLCLYIWFFALLICCFETHLAQVSRIIGENFGFLYNVKGRVTFFILVSFLCFSIGL-IGLISGVGLLVAAAYNAYVIYKHPDYEREMLENDVEQRGPSSVYGVAGSVVAPPGASSGGDSSWLEGAGAAAA 247          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.220e-20
Identity = 67/144 (46.53%), Postives = 84/144 (58.33%), Query Frame = 0
Query:    2 IYMRVANIALCGILAATAVLKLI-GAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAG 144
            IYMRVAN ALC +++A AVL +I  AG   A  VLA Y+               +VAK IA NFGFLY+AK RA FLIFVGVLCFSL      VAGA M+ NA+FN  V+ KYP++  +      E E   +++ N G   + G
Sbjct:   84 IYMRVANFALCILMSAAAVLTVIVPAGATPASWVLAFYV---------------LVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLGIT-GKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPGLARKVG 211          
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Match: A0A7S3JYJ7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYJ7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.080e-16
Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 0
Query:    2 IYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNS--DIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDL 125
            + MR+AN+    +LA  A LKL     DV+  V++ YL AF+ ++  FE H+  + K IA N GF+Y A GRA F+I +G+LCFS        +  G  ++V A+ N +++FK+P +ER  +  DL
Sbjct:   94 VLMRIANLCSAFLLACLAALKLQKNTGDVSSGVISFYLFAFAILIFTFECHVSFLGKVIADNLGFMYQAPGRASFMILLGMLCFSDEPLPGFGYFVGIFVIVTALLNAFIMFKFPNYERSCRINDL 219          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6353.17106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LTB9_ECTSI1.680e-10799.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFZ2_9STRA2.400e-5055.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482T2R9_9ARCH4.780e-3449.63Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
W7TT71_9STRA1.580e-3351.92Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A6U4HF89_9STRA2.410e-2744.17Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WC07_9STRA1.360e-2639.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2MMX0_9STRA1.400e-2435.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4EDS9_9STRA6.090e-2338.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9D7K6_9STRA1.220e-2046.53Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3JYJ7_9STRA1.080e-1638.89Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 3..114
e-value: 3.4E-11
score: 43.3
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 2..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..24
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6353contigEcto-sp13_S_contig6353:4976..7867 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6353.17106.1mRNA_Ecto-sp13_S_contig6353.17106.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6353 4820..8314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6353.17106.1 ID=prot_Ecto-sp13_S_contig6353.17106.1|Name=mRNA_Ecto-sp13_S_contig6353.17106.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
MIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFE
THLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMM
VNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARN
NPDLTRKGAQAAASTYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15