prot_Ecto-sp13_S_contig635.17104.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig635.17104.1
Unique Nameprot_Ecto-sp13_S_contig635.17104.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: D7FL93_ECTSI (Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL93_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 5.340e-38
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQ 65
            EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFK  ++
Sbjct:   52 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGGQE 116          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A1E7F829_9STRA (Thioredoxin domain-containing protein n=3 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F829_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 6.990e-20
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFF 60
            EKS+LYFTA WCPPC+ I P    LS+E P +SFGK+DIDDN+++A    I SVPTF FF
Sbjct:   53 EKSILYFTATWCPPCKLIKPVYESLSDEYPNISFGKIDIDDNQDSAMEYEISSVPTFLFF 112          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A7S1C0K1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0K1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.950e-18
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFF 60
            EKS+LYFTA WCPPC+ I P    +++E P V+FGKVD+DDN E+A    I  VPTF FF
Sbjct:   49 EKSILYFTATWCPPCKMIKPVYENMAKENPDVAFGKVDVDDNAESAAKYKISGVPTFVFF 108          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: X1A998_9ZZZZ (Thioredoxin domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1A998_9ZZZZ)

HSP 1 Score: 80.9 bits (198), Expect = 2.700e-18
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFF 60
            +KS+LYFTA WCPPC+ I P    +++E P V+FGKVDIDDN EAA    I  VPTF  F
Sbjct:   21 DKSILYFTATWCPPCKMIKPIYENMAKENPEVAFGKVDIDDNAEAAAKYEISGVPTFILF 80          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A448YUQ9_9STRA (Thioredoxin n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUQ9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.300e-18
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQ 65
            EKS+LYFTA WCPPC+ I P   ELSE+   ++FGKVDIDD  +AA    I SVPTF FF  +++
Sbjct:   20 EKSILYFTATWCPPCKIIKPVYEELSEKHENIAFGKVDIDDAYDAATEYQITSVPTFVFFNGNEK 84          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A836CF79_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF79_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.440e-17
Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFK 61
            +K+VLYFTAKWCPPCRRI P   +L+ E   V F KVDID N+ AA+ A I SVPTF F+K
Sbjct:   67 DKAVLYFTAKWCPPCRRIAPMYQDLAAEKSDVHFYKVDIDVNKAAAKDAGIMSVPTFIFYK 127          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A7S2P9F2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P9F2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.860e-16
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFF 60
            +KSV+YFTA WCPPC+ I P   E+SE+   V+FGKVD+DDN ++A    I +VPTF  F
Sbjct:   85 DKSVVYFTATWCPPCKVISPIYTEMSEKHAGVAFGKVDVDDNSDSAVDFEINAVPTFVLF 144          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A662Y436_9STRA (Thioredoxin domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y436_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.190e-16
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    2 KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQ 66
            K+++YFTAKWCPPC+ IGP   ELS +   ++F K+D+D+  +    A ++S+PTF +FK  K Q
Sbjct:    8 KAIVYFTAKWCPPCKMIGPIYDELSAKYDGIAFAKLDVDELNDTTSKAGVRSMPTFFYFKDGKLQ 72          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A6U3RSM6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RSM6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.700e-16
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASK 64
             KSVLYFTA WCPPC+ I P    +S+  P+V+FGKVD+D+N + A    I++VPTF  F   K
Sbjct:   51 SKSVLYFTATWCPPCKAIAPKYEAMSKRHPSVAFGKVDVDENSDVALDFEIRAVPTFVLFDGEK 114          
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Match: A0A067CR67_SAPPC (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CR67_SAPPC)

HSP 1 Score: 75.9 bits (185), Expect = 4.880e-16
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQ 66
             KSV+YFTA WC PC+ I P  A+LS E P V F KVD+D+ +E A  A ++++PTF F+   K Q
Sbjct:   46 SKSVVYFTAAWCGPCKMISPIYAQLSNEFPDVEFAKVDVDELDETAAKAGVRAMPTFHFYANGKLQ 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig635.17104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL93_ECTSI5.340e-3893.85Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A1E7F829_9STRA6.990e-2061.67Thioredoxin domain-containing protein n=3 Tax=Frag... [more]
A0A7S1C0K1_9STRA1.950e-1858.33Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
X1A998_9ZZZZ2.700e-1858.33Thioredoxin domain-containing protein n=1 Tax=mari... [more]
A0A448YUQ9_9STRA7.300e-1856.92Thioredoxin n=1 Tax=Pseudo-nitzschia multistriata ... [more]
A0A836CF79_9STRA2.440e-1762.30Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S2P9F2_9STRA2.860e-1655.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A662Y436_9STRA3.190e-1646.15Thioredoxin domain-containing protein n=1 Tax=Noth... [more]
A0A6U3RSM6_9STRA3.700e-1651.56Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A067CR67_SAPPC4.880e-1650.00Thioredoxin domain-containing protein n=2 Tax=Sapr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 11..20
score: 53.0
coord: 50..61
score: 39.21
coord: 3..11
score: 37.59
NoneNo IPR availableGENE3D3.40.30.10coord: 1..66
e-value: 8.4E-22
score: 79.0
NoneNo IPR availablePANTHERPTHR10438:SF405THIOREDOXIN-3-RELATEDcoord: 3..64
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 3..64
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 3..65
e-value: 3.3E-18
score: 65.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..66
score: 9.265
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 4..22
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 3..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig635contigEcto-sp13_S_contig635:20861..21061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig635.17104.1mRNA_Ecto-sp13_S_contig635.17104.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig635 20861..21061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig635.17104.1 ID=prot_Ecto-sp13_S_contig635.17104.1|Name=mRNA_Ecto-sp13_S_contig635.17104.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAH
IKSVPTFKFFKASKQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf