prot_Ecto-sp13_S_contig63496.17102.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig63496.17102.1
Unique Nameprot_Ecto-sp13_S_contig63496.17102.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length127
Homology
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BLAST of mRNA_Ecto-sp13_S_contig63496.17102.1 vs. uniprot
Match: D7G395_ECTSI (Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G395_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.330e-53
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0 
Query:    1 GALLALSVTNSCRLPVELPDLFFRWLLLGGESATVKHKHGQQLSPSCHAFEPSVEDMVALDKSLERPFEALKDAVQSEDALKGLLEIEDLPADTSAADYITYM 103
            GALLALSVTNSCRLPVELPDLFFRWLLLGGESA VK KHGQQLSPSC +FEPSVEDMVALDKSLERPFEALKDAVQS+DALKGLLEIEDLPADTSAADYI +M
Sbjct: 2212 GALLALSVTNSCRLPVELPDLFFRWLLLGGESAVVKQKHGQQLSPSCPSFEPSVEDMVALDKSLERPFEALKDAVQSDDALKGLLEIEDLPADTSAADYIAHM 2314
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BLAST of mRNA_Ecto-sp13_S_contig63496.17102.1 vs. uniprot
Match: A0A8J4C3Q5_9CHLO (HECT domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C3Q5_9CHLO)

HSP 1 Score: 50.8 bits (120), Expect = 9.620e-5
Identity = 38/124 (30.65%), Postives = 52/124 (41.94%), Query Frame = 0 
Query:    1 GALLALSVTNSCRLPVELPDLFFRWLLLGGESATVKHKHGQQLSPSCHAFEPSVEDMVALDKSLERPFEALKDAVQSEDALKGLLEIEDLPADTSAADYITYMVRQTFLEPVQWQMSEVREAFF 124
            G LL  S+ N   + + LP + FR LL G          G         F P++E +   D         +  A    D L+G+LE+E LPAD SA  Y  Y V +   + V WQ   +   FF
Sbjct:  448 GWLLGQSLLNRAPVGLPLPPVLFRALLEGT---------GTDCGSGGSGFVPTMEMLAEFDPDAATGINNV--AALPSDQLRGMLELEGLPADWSAEKYAQYAVTRILRDEVAWQSEALASGFF 560
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig63496.17102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G395_ECTSI2.330e-5393.20Possible MAPK n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A8J4C3Q5_9CHLO9.620e-530.65HECT domain-containing protein n=2 Tax=Volvox reti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 1..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig63496contigEcto-sp13_S_contig63496:107..487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig63496.17102.1mRNA_Ecto-sp13_S_contig63496.17102.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig63496 107..487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig63496.17102.1 ID=prot_Ecto-sp13_S_contig63496.17102.1|Name=mRNA_Ecto-sp13_S_contig63496.17102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp
GALLALSVTNSCRLPVELPDLFFRWLLLGGESATVKHKHGQQLSPSCHAF
EPSVEDMVALDKSLERPFEALKDAVQSEDALKGLLEIEDLPADTSAADYI
TYMVRQTFLEPVQWQMSEVREAFFRTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035983Hect_E3_ubiquitin_ligase