prot_Ecto-sp13_S_contig6342.17095.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6342.17095.1
Unique Nameprot_Ecto-sp13_S_contig6342.17095.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length310
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6342.17095.1 vs. uniprot
Match: A0A6H5KUU1_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU1_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 9.240e-107
Identity = 254/321 (79.13%), Postives = 261/321 (81.31%), Query Frame = 0 
Query:    1 MTGAATKAAAAATAVPNAPLSDSAGAGNVAAVEE-----------HRSSXXXXXXXXXXGCICGDLTLPAAHPQKVIVEAREERQQPLEEGAAPGTSPAAAAVGIDGNTASGACDDSVDSSGGGGR-AETGEGGTPTDRGRHTNGVSKMTTHPPARPPPVPASAIATKPRLAEWVKAEGQDDDSDVDTANSLRGGSGGSAPSSAGSELSCAXXXXXXXXXXXXARVFPAGAGATPPEAKGPEDVRSERGTPAKGGGERVSTEAGVGGGPEGGGVEAXXXXXXXXXXXXXXXXXXXVAARKLADWIKDGGVDDSEAETSTSG 309
            MTGAATKAAAAATAVPNAP+SD AGAG+VAAVEE           HRSS               DLT PAAH QK IVEA EE QQPLE GAAP TSPAAAAVGI+G+TASGA DDSVDSSGGGG  A+ GEGGTPTDRG HTNGVSKMTTHPPARPPPVPASA ATKPRLAEWVKAEG+DDDSDVDTANSLRGGSGGSAPSSAGSELSCA XXXXXXXXXX   VFPAGAGATPPEA+G ED R ERGTPAKG GERVSTEAGV           XXXXXXXXXXXXXXXXXXXVAARKLADWIKDGG DDSEAETSTSG
Sbjct:    1 MTGAATKAAAAATAVPNAPVSDPAGAGDVAAVEEQQTPNVSGGREHRSSSGDGRGGGR------DLTPPAAHLQKGIVEALEESQQPLERGAAPDTSPAAAAVGINGDTASGAYDDSVDSSGGGGGVAKAGEGGTPTDRGGHTNGVSKMTTHPPARPPPVPASATATKPRLAEWVKAEGEDDDSDVDTANSLRGGSGGSAPSSAGSELSCATXXXXXXXXXXG--VFPAGAGATPPEAEGSEDSRGERGTPAKGDGERVSTEAGVXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXVAARKLADWIKDGGADDSEAETSTSG 312
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BLAST of mRNA_Ecto-sp13_S_contig6342.17095.1 vs. uniprot
Match: D8LKC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKC8_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.860e-45
Identity = 118/179 (65.92%), Postives = 122/179 (68.16%), Query Frame = 0 
Query:  137 MTTHPPARPPPVPASAIATKPRLAEWVKAEGQDDDSDVDTANSLRGGSGGSAPSSAGSELSCAXXXXXXXXXXXX-----ARVFPAGAGATPPEAKGPEDVRSERGTPAKGGGERVSTEAGVGGGPEGGGVEAXXXXXXXXXXXXXXXXXXX-VAARKLADWIKDGGVDDSEAETSTSG 309
            MT HPPARPP  PASA ATKPRLAEWVK EG+DDDSDVDTANSLRGG                XXXXXXXXXXXX     A VFPAGAG TPPEAKG ED+   R TPAKG GERV TEA VGGGP+GG VEA              X     VA+RKLADWIKDGG DDSEAETSTSG
Sbjct:    1 MTMHPPARPPLGPASATATKPRLAEWVKVEGEDDDSDVDTANSLRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVFPAGAGTTPPEAKGSEDLGGGRQTPAKGDGERVFTEAEVGGGPKGGVVEAEAREGGGGTAPAAAXPATAAVASRKLADWIKDGGADDSEAETSTSG 179
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6342.17095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUU1_9PHAE9.240e-10779.13PIPK domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKC8_ECTSI2.860e-4565.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6342contigEcto-sp13_S_contig6342:2120..3049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6342.17095.1mRNA_Ecto-sp13_S_contig6342.17095.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6342 2120..4413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6342.17095.1 ID=prot_Ecto-sp13_S_contig6342.17095.1|Name=mRNA_Ecto-sp13_S_contig6342.17095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=310bp
MTGAATKAAAAATAVPNAPLSDSAGAGNVAAVEEHRSSSSSGDGRGGGGC
ICGDLTLPAAHPQKVIVEAREERQQPLEEGAAPGTSPAAAAVGIDGNTAS
GACDDSVDSSGGGGRAETGEGGTPTDRGRHTNGVSKMTTHPPARPPPVPA
SAIATKPRLAEWVKAEGQDDDSDVDTANSLRGGSGGSAPSSAGSELSCAT
TPAAAAAAAAAARVFPAGAGATPPEAKGPEDVRSERGTPAKGGGERVSTE
AGVGGGPEGGGVEAEASGGGGTATAAAAPAPAPVAARKLADWIKDGGVDD
SEAETSTSG*
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