prot_Ecto-sp13_S_contig63383.17087.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig63383.17087.1
Unique Nameprot_Ecto-sp13_S_contig63383.17087.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A6H5KDU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU0_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 8.490e-13
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MAQADRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNV 41
            MAQ DRKAL+ALYN T GAKW+ K+NWNT AALS+W GV V
Sbjct:  140 MAQPDRKALVALYNATGGAKWRNKRNWNTRAALSQWYGVEV 180          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.130e-11
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MAQADRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNV 41
            MAQ DR+AL+ALYN T GAKW+ K+NWNT AALS+W GV V
Sbjct:   96 MAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEV 136          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 3.940e-11
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MAQADRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNV 41
            MAQ DRKAL+ALYN T GA+WK  +NW T AALS+W GV V
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEV 111          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A6H5K9V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V5_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.200e-9
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 MAQADRKALIALYNGTCGAKWKQKKNWNTGAALSR 35
            M Q DRKAL+ALYN T GAKW+  +NWNT AALS+
Sbjct:   19 MVQTDRKALVALYNATGGAKWEHTRNWNTSAALSQ 53          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A661XQ56_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661XQ56_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 3.750e-6
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 0
Query:    3 QADRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNVTKG 44
            QA+R ALIALYN T G  W    NWNT   ++ W GV V  G
Sbjct:   28 QAERDALIALYNATDGPNWTNHFNWNTATTVNNWHGVTVIDG 69          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A352FEI0_9BACT (Uncharacterized protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A352FEI0_9BACT)

HSP 1 Score: 49.3 bits (116), Expect = 6.670e-6
Identity = 23/45 (51.11%), Postives = 27/45 (60.00%), Query Frame = 0
Query:    1 MAQADRKALIALYNGTCGAKWKQKKNWN-TGAALSRWEGVNVTKG 44
            ++QADR AL+ALYN T G  W    NW  T A +  W GV VT G
Sbjct:   34 VSQADRDALMALYNATGGPAWTNHTNWGGTAATVGTWYGVTVTSG 78          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: UPI001C889FC9 (T9SS type A sorting domain-containing protein n=1 Tax=Dyadobacter sp. NIV53 TaxID=2861765 RepID=UPI001C889FC9)

HSP 1 Score: 51.2 bits (121), Expect = 7.000e-6
Identity = 20/42 (47.62%), Postives = 27/42 (64.29%), Query Frame = 0
Query:    3 QADRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNVTKG 44
            +ADR AL+ LYNGT G +WK + NWNT  +   W G+  + G
Sbjct:   22 EADRAALVKLYNGTNGPQWKNQNNWNTTTSPCGWYGITCSDG 63          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A6L7ML79_9CHLR (Uncharacterized protein n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6L7ML79_9CHLR)

HSP 1 Score: 50.4 bits (119), Expect = 1.210e-5
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 0
Query:    5 DRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNV 41
            DR+AL+ALYN T GA W++  NW + A L RW GV  
Sbjct:  140 DREALVALYNATGGANWRENTNWLSSAPLGRWYGVKA 176          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A661Y3A7_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661Y3A7_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 1.300e-5
Identity = 22/42 (52.38%), Postives = 24/42 (57.14%), Query Frame = 0
Query:    3 QADRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNVTKG 44
            QA+R ALIALYN T G  W    NWNT   +  W GV V  G
Sbjct:   25 QAERDALIALYNSTDGPNWTNSNNWNTATTVDIWYGVVVADG 66          
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Match: A0A7X4BGF4_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7X4BGF4_9BACT)

HSP 1 Score: 48.5 bits (114), Expect = 6.310e-5
Identity = 22/37 (59.46%), Postives = 22/37 (59.46%), Query Frame = 0
Query:    5 DRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNV 41
            DR ALIALY  T GA WK   NW TGA L  W GV  
Sbjct:   10 DRAALIALYEATNGAGWKNSANWLTGAPLEDWYGVET 46          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig63383.17087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KDU0_9PHAE8.490e-1373.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVC7_9PHAE1.130e-1170.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK2_ECTSI3.940e-1168.29Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K9V5_9PHAE2.200e-968.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A661XQ56_9BACT3.750e-652.38Uncharacterized protein (Fragment) n=1 Tax=Bactero... [more]
A0A352FEI0_9BACT6.670e-651.11Uncharacterized protein n=1 Tax=Bacteroidales bact... [more]
UPI001C889FC97.000e-647.62T9SS type A sorting domain-containing protein n=1 ... [more]
A0A6L7ML79_9CHLR1.210e-554.05Uncharacterized protein n=2 Tax=Dehalococcoidia ba... [more]
A0A661Y3A7_9BACT1.300e-552.38Por_Secre_tail domain-containing protein n=1 Tax=B... [more]
A0A7X4BGF4_9BACT6.310e-559.46Uncharacterized protein n=1 Tax=Gemmatimonadales b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..54
e-value: 2.7E-7
score: 31.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig63383contigEcto-sp13_S_contig63383:500..688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig63383.17087.1mRNA_Ecto-sp13_S_contig63383.17087.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig63383 466..733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig63383.17087.1 ID=prot_Ecto-sp13_S_contig63383.17087.1|Name=mRNA_Ecto-sp13_S_contig63383.17087.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp
MAQADRKALIALYNGTCGAKWKQKKNWNTGAALSRWEGVNVTKGLCFGSV
FGLKQPPRYSKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf