prot_Ecto-sp13_S_contig6335.17081.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6335.17081.1
Unique Nameprot_Ecto-sp13_S_contig6335.17081.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length471
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6335.17081.1 vs. uniprot
Match: A0A6H5KMH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH1_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 8.110e-164
Identity = 343/446 (76.91%), Postives = 353/446 (79.15%), Query Frame = 0 
Query:   28 SASYGVVGQKRKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXINNQSSGRRKMAPTSGXXXXXXXXISHAGRQQPQPQYPNGVDPAGRPNSVGSSVSSGMGEWGDSRHDAAGHWPVDHDNPGSIGVVGDGPRLRHTVNRDSSRNFPVGYPFHGEKEMRVGGGPAHMMGGEEVTLLPRHXXXXXXXXXXXXXPQQQLDQHRLNQQRXXXXXXXXXXXXXXXXXXXXXQQXXXXXXXXXXWRGRHEGGTPPAAPPELYRLPQLGEAVPHDVGVPEPATPPPRLSXXXXXXXX-TSAPDDTPSLEKQHTDADSFSRLKPPKAKTEPVEAPSPKRHAGQRGDEVDDKVAG--VDGSEMAGGRKPPGSPAAGGVGGEDVEEDAGAAAFVLRRPRILLPWAARKEGLPPPLLLTNKGWTEWEWQPVIMNIPA 470
            SASYGVVGQ    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXX NNQSSGRRKMAPTSG        I  AGR Q QPQ+P GVD AGRPNSVGSSVSSGMGEWGDSRHDAAG WPVD  +PGSIGV GDGPRLRHT NRDS+RNFP GYPFHGEKEMRVGGGPAHMMG          XXXXXXXXXXXX  QQQLD+HRLNQ+R                     QQ          WRG HE GT P APPELYRLPQLG+AVPHDVGVPEPATP     XXXXXXX  TS  DDTPSLE+QHTDADS SRL+PP AK+EPVEAPSP+R AGQRGDEVDDK AG  VDGSEMAGGRKPPGSPA   VGG D EEDAGAAAFVLRRPRILLPWAARKEGLPPPLLLTNKGWTEWEWQPV MNIPA
Sbjct:   93 SASYGVVGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTNKXXXXXXXXXXXXXXXNNQSSGRRKMAPTSGVGGEGGVGIGRAGRHQQQPQHPEGVDLAGRPNSVGSSVSSGMGEWGDSRHDAAGDWPVDQHHPGSIGVAGDGPRLRHTANRDSTRNFPAGYPFHGEKEMRVGGGPAHMMGXXXXXXXXXXXXXXXXXXXXXXL-QQQLDRHRLNQRRQH-------------------QQQR--------WRGTHEWGTLPPAPPELYRLPQLGKAVPHDVGVPEPATPSXXXXXXXXXXXRNTSVSDDTPSLEQQHTDADSSSRLEPPIAKSEPVEAPSPERPAGQRGDEVDDKGAGAGVDGSEMAGGRKPPGSPA---VGGTDAEEDAGAAAFVLRRPRILLPWAARKEGLPPPLLLTNKGWTEWEWQPVTMNIPA 507
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BLAST of mRNA_Ecto-sp13_S_contig6335.17081.1 vs. uniprot
Match: D7FWU9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU9_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.340e-31
Identity = 78/135 (57.78%), Postives = 87/135 (64.44%), Query Frame = 0 
Query:  342 DDTPSLEKQHTDADSFSRLKPPKAKTEPVEAPSPKRHAGQRGDEVDDKVAGVDGSEMAGGRKPPGSPAAGGVGGEDVEEDAGAAAFVLRRPRILLPWAARKEG------LPPPLLLTNKGWTEWEWQPVIMNIPA 470
            DDT SL+++HTDADS SRL+PP AK+EPVEAPSP+RHAGQRGDEVDD   GV GSE+AGGRK  GSPAAG V                                     +P PLLLTNKGWTEWEWQPV+MNIPA
Sbjct:  127 DDTSSLQQEHTDADSSSRLRPPLAKSEPVEAPSPERHAGQRGDEVDDNGTGVGGSEVAGGRKRLGSPAAGXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPXPLLLTNKGWTEWEWQPVMMNIPA 261
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6335.17081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMH1_9PHAE8.110e-16476.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU9_ECTSI1.340e-3157.78EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6335contigEcto-sp13_S_contig6335:4998..6410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6335.17081.1mRNA_Ecto-sp13_S_contig6335.17081.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6335 4998..6410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6335.17081.1 ID=prot_Ecto-sp13_S_contig6335.17081.1|Name=mRNA_Ecto-sp13_S_contig6335.17081.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=471bp
RRCCAKHAEDGMVKLDKKLCPFKGCFTSASYGVVGQKRKFCAAHAERGMV
SIGGRRCAKEDCSKRANYGVAGTNKREFCAGHAAKGMVNINNQSSGRRKM
APTSGGGGGGGGGISHAGRQQPQPQYPNGVDPAGRPNSVGSSVSSGMGEW
GDSRHDAAGHWPVDHDNPGSIGVVGDGPRLRHTVNRDSSRNFPVGYPFHG
EKEMRVGGGPAHMMGGEEVTLLPRHYQQQRQQQRQQHHPQQQLDQHRLNQ
QRHQHQHQLHQHQLEHQRQVHQHQQQQQQQQQQQRWRGRHEGGTPPAAPP
ELYRLPQLGEAVPHDVGVPEPATPPPRLSSPPPPPRKTSAPDDTPSLEKQ
HTDADSFSRLKPPKAKTEPVEAPSPKRHAGQRGDEVDDKVAGVDGSEMAG
GRKPPGSPAAGGVGGEDVEEDAGAAAFVLRRPRILLPWAARKEGLPPPLL
LTNKGWTEWEWQPVIMNIPA*
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