prot_Ecto-sp13_S_contig63346.17080.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig63346.17080.1
Unique Nameprot_Ecto-sp13_S_contig63346.17080.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length116
Homology
BLAST of mRNA_Ecto-sp13_S_contig63346.17080.1 vs. uniprot
Match: A0A6H5JMJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ1_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.290e-36
Identity = 77/116 (66.38%), Postives = 79/116 (68.10%), Query Frame = 0
Query:    1 CLLAGCQLGRCAKLGWIMFVLMVRAMWEAKRRARPDPPVPVPGANGMEGALGNLVEPVPGALVLAANDVEEPPTNLEAAVFGSALPFSLSPLPPLPGRSISAPERLISTPDVVTAE 116
            CLLA   L RCAK GWIMFVLMVRAMWEAKRR R DPP PVPGA+ MEGA  NLVEPVPG                 A V GS LP SL P  PLPGRSISAPERLIS P +VTAE
Sbjct:  107 CLLAY-FLWRCAKHGWIMFVLMVRAMWEAKRRERHDPPAPVPGADDMEGAPANLVEPVPGXXXXXXXXXXXXXXXXXAVVLGSDLPLSLRPPNPLPGRSISAPERLISRPVIVTAE 221          
BLAST of mRNA_Ecto-sp13_S_contig63346.17080.1 vs. uniprot
Match: D7FU59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU59_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 3.440e-33
Identity = 75/111 (67.57%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    1 CLLAGCQLGRCAKLGWIMFVLMVRAMWEAKRRARPDPPVPVPGANGMEGALGNLVEPVPGALVLAANDVEEPPTNLEA-AVFGSALPFSLSPLPPLPGRSISAPERLISTP 110
            CLLA   LGRCAKLGWIMFVLMVRAMWEAKRR RPDPP P  G N +EGA  NLVEPV                   A AVFGSALP SL P  PLPGRSISAPERLISTP
Sbjct:  199 CLLAY-FLGRCAKLGWIMFVLMVRAMWEAKRRERPDPPAPALGDNDVEGAPANLVEPVXXXXXXXXXXXXXXXXXXAASAVFGSALPLSLRPPAPLPGRSISAPERLISTP 308          
BLAST of mRNA_Ecto-sp13_S_contig63346.17080.1 vs. uniprot
Match: D7FU58_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU58_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.390e-25
Identity = 71/131 (54.20%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    1 CLLAGCQLGRCAKLGWIMFVLMVRAMWEAKRRARPDPPVPVPGANGMEGALGNLVEP-------------VPGALVLAANDVEE--PPTNLEAAVFGSALPFSLSPLPPLPGRSISAPERLISTPDVVTAE 116
            C+LA   LGRCAKL W +FVLMVR   EAKRRARP PP PV G +  EGA  N+ EP             VP A   AA    E  PP  + AAV GSAL   L   PPLP RSISAPERLIS P V+ AE
Sbjct:   40 CILAN-FLGRCAKLAWTVFVLMVRRQLEAKRRARPGPPAPVLGDDDEEGAPPNVAEPAAPVXXXPQGTGNVPNAAGEAAGTGPEVEPPAVVAAAVSGSALLLGLRLPPPLPRRSISAPERLISRPAVIVAE 169          
BLAST of mRNA_Ecto-sp13_S_contig63346.17080.1 vs. uniprot
Match: D7G971_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G971_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 5.170e-25
Identity = 67/125 (53.60%), Postives = 74/125 (59.20%), Query Frame = 0
Query:    8 LGRCAKLGWIMFVLMVRAMWEAKRRARPDPPVPVPGANGMEGALGNLVEP--------------VPGALVLAAND-VEEPPTNLEAA-VFGSALPFSLSPLPPLPGRSISAPERLISTPDVVTAE 116
            LGRCAKL W +FVLMVR  WEAKR A P PP PV G +  EGA  N+ EP              VP A   AA   VE  P+ + AA V GSAL  SL P PPL  RSISAP RL+STP VV A+
Sbjct:   12 LGRCAKLAWTVFVLMVRRQWEAKRNALPGPPAPVLGDDDEEGAPANVAEPEATVPPPPPQGTENVPNAAGEAAGTGVEVEPSRIVAATVSGSALLLSLVPPPPLSARSISAPARLVSTPVVVAAD 136          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig63346.17080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JMJ1_9PHAE3.290e-3666.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU59_ECTSI3.440e-3367.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU58_ECTSI1.390e-2554.20Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G971_ECTSI5.170e-2553.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig63346contigEcto-sp13_S_contig63346:435..782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig63346.17080.1mRNA_Ecto-sp13_S_contig63346.17080.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig63346 433..782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig63346.17080.1 ID=prot_Ecto-sp13_S_contig63346.17080.1|Name=mRNA_Ecto-sp13_S_contig63346.17080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
CLLAGCQLGRCAKLGWIMFVLMVRAMWEAKRRARPDPPVPVPGANGMEGA
LGNLVEPVPGALVLAANDVEEPPTNLEAAVFGSALPFSLSPLPPLPGRSI
SAPERLISTPDVVTAE
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