prot_Ecto-sp13_S_contig6313.17055.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6313.17055.1
Unique Nameprot_Ecto-sp13_S_contig6313.17055.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length253
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6313.17055.1 vs. uniprot
Match: D8LTC7_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC7_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 2.090e-83
Identity = 241/253 (95.26%), Postives = 245/253 (96.84%), Query Frame = 0 
Query:    1 MQAMVDEQRRLQQAKQSLDDMENQKEGGTAEAVCERLGRRQFEEGEDVFAVQWSGIHKMAQTGDIRGLRFFLEDSNTPPNIRDDRGDTPLNTAAHAGQSAAVEELLKHGANVNAKNNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNSVKSIKAIYECVGDPGVLSAQSHNXXXXXXXXXXXXXXXXXXXXXXLGANMDKQDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTNDE 253
            MQAMVDEQRRLQQAKQSL+DME QKEG TAEAVCERLGRRQFEEGED+FAVQWSGIHKMAQTGDIRGLRFFLEDSNTPPNIRDDRGDTPLNTAAHAGQSAAVEELLKHGA+VNA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NSV+SIKAIYEC GDPGVLSAQSHNXXXXXXXXXXXXXXXXXXXXXXLGANMDKQDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTNDE
Sbjct:    1 MQAMVDEQRRLQQAKQSLEDMEKQKEGSTAEAVCERLGRRQFEEGEDLFAVQWSGIHKMAQTGDIRGLRFFLEDSNTPPNIRDDRGDTPLNTAAHAGQSAAVEELLKHGADVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVQSIKAIYECFGDPGVLSAQSHNXXXXXXXXXXXXXXXXXXXXXXLGANMDKQDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTNDE 253
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BLAST of mRNA_Ecto-sp13_S_contig6313.17055.1 vs. uniprot
Match: A0A1D2NJ43_ORCCI (Tonsoku-like protein n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NJ43_ORCCI)

HSP 1 Score: 55.1 bits (131), Expect = 5.460e-5
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0 
Query:   54 SGIHKMAQTGDIRGLRFFLEDSNTPPNIRDDRGDTPLNTAAHAGQSAAVEELLKHGANVNA 114
            S +H  A+ GD++ +R  +   N P N+ D+   TPL+ A++ G +  VEELLKHGA+VNA
Sbjct:  294 SQLHLAAKKGDLKAVRRLIR-QNHPVNVTDNAKWTPLHEASNYGHAEVVEELLKHGADVNA 353
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6313.17055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTC7_ECTSI2.090e-8395.26Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A1D2NJ43_ORCCI5.460e-544.26Tonsoku-like protein n=1 Tax=Orchesella cincta Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..31
NoneNo IPR availablePIRSFPIRSF000654ILKcoord: 155..253
e-value: 5.2E-10
score: 36.5
coord: 2..171
e-value: 5.5E-18
score: 62.8
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 82..248
NoneNo IPR availablePANTHERPTHR24189:SF50coord: 60..160
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 60..160
NoneNo IPR availablePANTHERPTHR24189:SF50coord: 82..248
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 220..249
e-value: 0.11
score: 21.7
coord: 187..216
e-value: 0.0066
score: 25.7
coord: 51..81
e-value: 3300.0
score: 1.1
coord: 85..114
e-value: 0.0022
score: 27.3
coord: 118..147
e-value: 23.0
score: 13.9
coord: 151..180
e-value: 110.0
score: 11.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 118..150
score: 8.63
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 187..219
score: 12.209
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 85..117
score: 13.651
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 220..252
score: 11.541
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 157..251
e-value: 7.3E-12
score: 45.7
coord: 57..149
e-value: 9.4E-11
score: 42.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 51..253
score: 47.589
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 179..253
e-value: 6.1E-17
score: 63.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 52..178
e-value: 5.3E-29
score: 102.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 51..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6313contigEcto-sp13_S_contig6313:26..4820 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6313.17055.1mRNA_Ecto-sp13_S_contig6313.17055.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6313 26..4985 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6313.17055.1 ID=prot_Ecto-sp13_S_contig6313.17055.1|Name=mRNA_Ecto-sp13_S_contig6313.17055.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=253bp
MQAMVDEQRRLQQAKQSLDDMENQKEGGTAEAVCERLGRRQFEEGEDVFA
VQWSGIHKMAQTGDIRGLRFFLEDSNTPPNIRDDRGDTPLNTAAHAGQSA
AVEELLKHGANVNAKNNKGWTPALSASSTDHRDVMMLLHHAGADLKMKDI
TGSTAAHMAASTNSVKSIKAIYECVGDPGVLSAQSHNGSTPAHIAAIFDN
AEALKALYELGANMDKQDRSGETPAHKAAKSHHVRCVEFLQAVGADMNTT
NDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf