prot_Ecto-sp13_S_contig62994.17039.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62994.17039.1
Unique Nameprot_Ecto-sp13_S_contig62994.17039.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
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BLAST of mRNA_Ecto-sp13_S_contig62994.17039.1 vs. uniprot
Match: D8LKP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP2_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.520e-37
Identity = 69/87 (79.31%), Postives = 71/87 (81.61%), Query Frame = 0 
Query:    1 MTETFECDLKSLLGEEAFLYDPYIVDEATTYIPNDRSKQLVVCLHPIAVLNVNYGDGASSPNLNIRALDELDDIFTRRFFFFDSVSG 87
            MTETFECDLKSLLGEEAF YDPYIVDEAT              LHPIAVLNVNYGDG S+PNLNIRALDELDD+FTRRFFFFDSVSG
Sbjct:  273 MTETFECDLKSLLGEEAFFYDPYIVDEATGE------------LHPIAVLNVNYGDGVSTPNLNIRALDELDDVFTRRFFFFDSVSG 347
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BLAST of mRNA_Ecto-sp13_S_contig62994.17039.1 vs. uniprot
Match: A0A7S1TPB6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPB6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 8.730e-10
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 0 
Query:    3 ETFECDLKSLLGEEAFLYDPYIVDEATTYIPNDRSKQLVVCLHPIAVLNVNY-GDGASSPNLNIRALDELDDIFTRRFFFFDSVSG 87
            + + CDLK+LL +E    D YIVD++T              L P+ V N NY       PNLN    DE+DD++TRRFF +D +SG
Sbjct:  433 DKYRCDLKTLLYDEQVFMDLYIVDKSTD------------TLFPVPVRNKNYVRANGQLPNLNEDIEDEIDDVYTRRFFLYDVISG 506
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BLAST of mRNA_Ecto-sp13_S_contig62994.17039.1 vs. uniprot
Match: A0A7S4A157_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A157_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 7.760e-9
Identity = 33/83 (39.76%), Postives = 44/83 (53.01%), Query Frame = 0 
Query:    5 FECDLKSLLGEEAFLYDPYIVDEATTYIPNDRSKQLVVCLHPIAVLNVNYGDGASSPNLNIRALDELDDIFTRRFFFFDSVSG 87
            F CDL++LLG E   YD Y+VD        D       CL+PI +L+ +  +G   PN N +     DDIF RRF FF++  G
Sbjct:  455 FHCDLRTLLGREQLFYDLYLVDPDAGCGNED-------CLYPIPILHKDLINGNHYPNKNGKTAQGRDDIFVRRFSFFNTFLG 530
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62994.17039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKP2_ECTSI1.520e-3779.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TPB6_9STRA8.730e-1040.70Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4A157_9STRA7.760e-939.76Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62994contigEcto-sp13_S_contig62994:10..520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62994.17039.1mRNA_Ecto-sp13_S_contig62994.17039.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62994 1..520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62994.17039.1 ID=prot_Ecto-sp13_S_contig62994.17039.1|Name=mRNA_Ecto-sp13_S_contig62994.17039.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MTETFECDLKSLLGEEAFLYDPYIVDEATTYIPNDRSKQLVVCLHPIAVL
NVNYGDGASSPNLNIRALDELDDIFTRRFFFFDSVSG*
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