prot_Ecto-sp13_S_contig6294.17034.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6294.17034.1
Unique Nameprot_Ecto-sp13_S_contig6294.17034.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6294.17034.1 vs. uniprot
Match: A0A6H5KJ99_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJ99_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.130e-65
Identity = 109/116 (93.97%), Postives = 112/116 (96.55%), Query Frame = 0 
Query:   16 MMTKFGRIALCLLSFKGGSQSFTLRAHSAIRRAPVGRERVDCGGIGGGGVILNKSGYSARSRLSSSVIVDVESTSTDEPVEDLKARLLRASAGVNRGLSCREGDQEEILEIVEELE 131
            MM +FGRIA CLLSFKGGSQSFTLRAHSA+RRAPV RERVDCGGIGGGGVILNK+GYSARSRLSSSVIVDVESTSTDEPV DLKARLLRASAGVNRGLSCREGDQEEILEIVEELE
Sbjct:    1 MMKRFGRIATCLLSFKGGSQSFTLRAHSAVRRAPVRRERVDCGGIGGGGVILNKTGYSARSRLSSSVIVDVESTSTDEPVGDLKARLLRASAGVNRGLSCREGDQEEILEIVEELE 116
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6294.17034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ99_9PHAE1.130e-6593.97PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6294contigEcto-sp13_S_contig6294:6959..8101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6294.17034.1mRNA_Ecto-sp13_S_contig6294.17034.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6294 6959..8101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6294.17034.1 ID=prot_Ecto-sp13_S_contig6294.17034.1|Name=mRNA_Ecto-sp13_S_contig6294.17034.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
AVYPVELGLPNSNRVMMTKFGRIALCLLSFKGGSQSFTLRAHSAIRRAPV
GRERVDCGGIGGGGVILNKSGYSARSRLSSSVIVDVESTSTDEPVEDLKA
RLLRASAGVNRGLSCREGDQEEILEIVEELE
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