prot_Ecto-sp13_S_contig62877.17029.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62877.17029.1
Unique Nameprot_Ecto-sp13_S_contig62877.17029.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length72
Homology
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.810e-29
Identity = 57/61 (93.44%), Postives = 57/61 (93.44%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 61
            A A   RRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV
Sbjct:  389 ALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 449          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 2.820e-29
Identity = 57/61 (93.44%), Postives = 57/61 (93.44%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 61
            A A   RRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV
Sbjct:  499 ALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 559          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.100e-22
Identity = 48/63 (76.19%), Postives = 51/63 (80.95%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVRR 63
            A A   RRGLLLP+RLP A P+V RA+AYDVRRG  GVGAHVRDAACYVCWAFARAYSP   R
Sbjct:  463 ALAELARRGLLLPQRLPVAVPVVIRAMAYDVRRGTTGVGAHVRDAACYVCWAFARAYSPAALR 525          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A7S2SV11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV11_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.150e-21
Identity = 47/67 (70.15%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVRRLCAD 67
            A A   RRGLLLP RLP A P+V +A+ YDVRRG+  VGAHVRDAACYVCWAFARAYSP V R   D
Sbjct:   40 ALAELARRGLLLPFRLPEAVPVVAKAIQYDVRRGSNSVGAHVRDAACYVCWAFARAYSPAVMRPHVD 106          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A7S1CFH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFH1_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.910e-21
Identity = 47/63 (74.60%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVRR 63
            A A   RRGLLLP  LP A P+V +ALAYDVRRGA  VG HVRDAACYVCWAFARAYSP V R
Sbjct:   87 ALAELARRGLLLPSLLPEAVPVVVKALAYDVRRGAHSVGTHVRDAACYVCWAFARAYSPSVMR 149          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A150GJ61_GONPE (TFCD_C domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GJ61_GONPE)

HSP 1 Score: 92.4 bits (228), Expect = 3.200e-20
Identity = 46/68 (67.65%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVRRLCADL 68
            A A   RRGLLLPERLP   PLVR AL YDVRRG   +GAHVRDAA YVCWAFARAY P++   C  L
Sbjct:  436 ALAELARRGLLLPERLPGLMPLVRAALHYDVRRGPHSIGAHVRDAAAYVCWAFARAYDPQLLEDCVTL 503          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A4D9D438_9STRA (TFCD_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D438_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 3.210e-20
Identity = 46/63 (73.02%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVRR 63
            A A   RRG LLPERL  A P+V RAL YDVRRG   VGAHVRDAACYVCWAFARAYSP+  R
Sbjct:  478 ALAELARRGSLLPERLGLAVPVVTRALRYDVRRGQASVGAHVRDAACYVCWAFARAYSPQAMR 540          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A7S0Z3E4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z3E4_9CRYP)

HSP 1 Score: 89.0 bits (219), Expect = 7.310e-20
Identity = 43/61 (70.49%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 61
            A A   RRGLLLP RLP A PLV  +L YDVR+G+  VGAHVRDAACYVCWA ARAY+P V
Sbjct:   38 ALAELARRGLLLPARLPAAVPLVLSSLKYDVRKGSASVGAHVRDAACYVCWALARAYAPSV 98          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A9VCK1_MONBE (ATP synthase subunit d, mitochondrial n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VCK1_MONBE)

HSP 1 Score: 91.3 bits (225), Expect = 8.180e-20
Identity = 45/59 (76.27%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    3 AHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 61
            A   RRGLLLPERLP   PLVRRAL YDV  G   VGAHVRDAACYVCWAFARAY+P V
Sbjct:  831 AELARRGLLLPERLPDIMPLVRRALVYDVFVGVNSVGAHVRDAACYVCWAFARAYAPAV 889          
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Match: A0A836BXK6_9CHLO (TFCD_C domain-containing protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BXK6_9CHLO)

HSP 1 Score: 90.5 bits (223), Expect = 1.520e-19
Identity = 44/61 (72.13%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRV 61
            A A   RRGLLLPERLP   PLVR AL YDVRRG   +GAHVRDAA YVCWAFARAY P++
Sbjct:  442 ALAELARRGLLLPERLPAIIPLVREALHYDVRRGPHSIGAHVRDAAAYVCWAFARAYEPQL 502          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62877.17029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH41_9PHAE2.810e-2993.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNX3_ECTSI2.820e-2993.44Tubulin folding cofactor D n=1 Tax=Ectocarpus sili... [more]
A0A835ZJS0_9STRA4.100e-2276.19Tubulin folding cofactor D n=1 Tax=Tribonema minus... [more]
A0A7S2SV11_9STRA1.150e-2170.15Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1CFH1_9STRA4.910e-2174.60Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A150GJ61_GONPE3.200e-2067.65TFCD_C domain-containing protein n=1 Tax=Gonium pe... [more]
A0A4D9D438_9STRA3.210e-2073.02TFCD_C domain-containing protein n=2 Tax=Monodopsi... [more]
A0A7S0Z3E4_9CRYP7.310e-2070.49Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A9VCK1_MONBE8.180e-2076.27ATP synthase subunit d, mitochondrial n=1 Tax=Mono... [more]
A0A836BXK6_9CHLO1.520e-1972.13TFCD_C domain-containing protein n=2 Tax=Edaphochl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62877contigEcto-sp13_S_contig62877:182..397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62877.17029.1mRNA_Ecto-sp13_S_contig62877.17029.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62877 182..397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62877.17029.1 ID=prot_Ecto-sp13_S_contig62877.17029.1|Name=mRNA_Ecto-sp13_S_contig62877.17029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp
ATAHWCRRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVC
WAFARAYSPRVRRLCADLGGR*
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