prot_Ecto-sp13_S_contig62847.17024.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62847.17024.1
Unique Nameprot_Ecto-sp13_S_contig62847.17024.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
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BLAST of mRNA_Ecto-sp13_S_contig62847.17024.1 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 9.180e-26
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:    1 MATACDISFDEMAMALSYISLGGIAAAPASSARGLPSLAPVKQEKKAAKKPEADDEV 57
            MATACDISFDEMAMALSYISLGG AAAPASSARGLPSLAPVKQEKKAAKKPEADDEV
Sbjct:    1 MATACDISFDEMAMALSYISLGGTAAAPASSARGLPSLAPVKQEKKAAKKPEADDEV 57
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62847.17024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFV9_9PHAE9.180e-2698.25EF1_GNE domain-containing protein n=3 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62847contigEcto-sp13_S_contig62847:567..746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62847.17024.1mRNA_Ecto-sp13_S_contig62847.17024.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62847 567..746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62847.17024.1 ID=prot_Ecto-sp13_S_contig62847.17024.1|Name=mRNA_Ecto-sp13_S_contig62847.17024.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
MATACDISFDEMAMALSYISLGGIAAAPASSARGLPSLAPVKQEKKAAKK
PEADDEVRR*
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