prot_Ecto-sp13_S_contig62839.17021.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62839.17021.1
Unique Nameprot_Ecto-sp13_S_contig62839.17021.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A6H5JW39_9PHAE (AMP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JW39_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 6.050e-59
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0
Query:    1 MDYDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQ 95
            MDYDTLVDMHLITRQ+FGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQ
Sbjct:   75 MDYDTLVDMHLITRQSFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQ 169          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A835ZGH2_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGH2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.260e-38
Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = 0
Query:    1 MDYDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQV 96
            MD+DTLVDMHL+TRQ+FGNRPLFGT+K   D  + W TYKEFG++VD  R ALARLGI  GD V  IS+NREEWAV AYA YSLGA FVPMYE+Q+
Sbjct:    1 MDFDTLVDMHLVTRQSFGNRPLFGTKK---DGTYRWTTYKEFGRKVDVARVALARLGIARGDVVACISSNREEWAVTAYAVYSLGAAFVPMYEDQL 93          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A0G3A2D5_9DELT (Long-chain acyl-CoA synthetase n=3 Tax=Archangium TaxID=47 RepID=A0A0G3A2D5_9DELT)

HSP 1 Score: 108 bits (270), Expect = 1.730e-25
Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    3 YDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQVSE 98
            ++TLVD+ L +  +FG RPLFG +K  +   + W+TY +FG+ VD  R  LA+LG+T GD V +ISNNR EWAV AYA Y+LGA +VPMYE Q+ +
Sbjct:    6 FETLVDIFLQSIASFGPRPLFGEKKNGQ---WNWMTYIQFGQMVDDLRGGLAQLGVTQGDRVAVISNNRHEWAVGAYACYTLGAAYVPMYEAQLDK 98          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A4Y6PWS5_9DELT (Long-chain fatty acid--CoA ligase n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PWS5_9DELT)

HSP 1 Score: 107 bits (268), Expect = 3.250e-25
Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    1 MDYDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQVSE 98
            ++Y  LV+++  +   F  + LFG ++   D  ++W++Y +FG++V+RCRAALA +G+ HGDTV IISNNR EWA+ AYATY+LGA + PMYE Q  +
Sbjct:   14 LEYRNLVEIYHHSIDHFAEQKLFGVKR---DGQYQWMSYADFGERVERCRAALASMGVEHGDTVAIISNNRPEWAIGAYATYTLGARWCPMYEAQAEK 108          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: UPI00194DED16 (long-chain fatty acid--CoA ligase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00194DED16)

HSP 1 Score: 107 bits (267), Expect = 4.450e-25
Identity = 50/93 (53.76%), Postives = 67/93 (72.04%), Query Frame = 0
Query:    3 YDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQ 95
            ++TLVD+ L +   FG R LFG +K  +   + W+TY +FG+ VD  R  L++LG+THGD V +ISNNR EWAV AYA Y+LGA +VPMYE+Q
Sbjct:    6 FETLVDIFLQSTAHFGPRQLFGEKKNGQ---WTWMTYVQFGQMVDDLRGGLSQLGVTHGDRVAVISNNRHEWAVGAYACYTLGAAYVPMYEQQ 95          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A2E0TCA1_9DELT (Long-chain fatty acid--CoA ligase n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2E0TCA1_9DELT)

HSP 1 Score: 107 bits (266), Expect = 6.090e-25
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    3 YDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQV 96
            +  LVD++     TF +RPLFGT++   D  + W+TY EF KQVD  R ALA LG+  GD + I++NNR EWA+ AYA+Y LGA FVPMYE Q+
Sbjct:    8 FRNLVDLYEHATTTFADRPLFGTKQ---DGRWVWMTYGEFRKQVDALRGALAELGLEKGDRIAIVANNRPEWAIAAYASYGLGAAFVPMYESQM 98          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A5B8XPQ5_9DELT (Long-chain fatty acid--CoA ligase n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XPQ5_9DELT)

HSP 1 Score: 106 bits (264), Expect = 1.120e-24
Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 0
Query:    2 DYDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQV 96
            ++  LV+M+  + + FG  PLFGT++   D  ++W+TY++FG+  D  R ALA LG+T GDTV II+NNR EWAV A+ATY LGA F PMYE Q+
Sbjct:    4 EFTNLVEMYESSIKAFGPNPLFGTKR---DGAYKWMTYQKFGEITDSFRGALATLGVTKGDTVAIIANNRVEWAVAAHATYGLGARFCPMYEAQM 95          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A485LZ48_9ZZZZ (Long-chain-fatty-acid--CoA ligase FadD15 n=1 Tax=anaerobic digester metagenome TaxID=1263854 RepID=A0A485LZ48_9ZZZZ)

HSP 1 Score: 105 bits (263), Expect = 1.540e-24
Identity = 46/95 (48.42%), Postives = 69/95 (72.63%), Query Frame = 0
Query:    4 DTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQVSE 98
            D LVD    +   + + P+ GT+    +  +EW+TY+EFG++VD  RA LA+LG+  GDTVG+I+NNR EWA+CA+AT+ LGA +VPMYE ++++
Sbjct:    8 DNLVDFLEGSVSKYPDNPMLGTKNSSGE--YEWITYREFGRRVDNARAGLAQLGVKRGDTVGLIANNRTEWAICAFATFGLGAKWVPMYEAELTQ 100          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A4U0ZNL9_9DELT (Long-chain fatty acid--CoA ligase n=1 Tax=Desulforhopalus sp. IMCC35007 TaxID=2569543 RepID=A0A4U0ZNL9_9DELT)

HSP 1 Score: 105 bits (263), Expect = 1.550e-24
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 0
Query:    4 DTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQV 96
            D LV+M  ++      RPLFGT   D++  + W +YK+ GK++D  RAALA+ G+T GD VGII+NNR EWAV A+AT+ LGA FVPMYE+++
Sbjct:    8 DNLVEMFELSLARHAERPLFGTP--DQNGTYTWASYKDIGKRIDNLRAALAQQGVTAGDAVGIIANNRTEWAVAAFATFGLGARFVPMYEKEL 98          
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Match: A0A1V5H8B5_9DELT (Long-chain-fatty-acid--CoA ligase FadD15 n=1 Tax=Deltaproteobacteria bacterium ADurb.BinA179 TaxID=1852872 RepID=A0A1V5H8B5_9DELT)

HSP 1 Score: 105 bits (262), Expect = 2.120e-24
Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 0
Query:    4 DTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQVSE 98
            D LVD    +   +   PLFGT K D+   +EW+TY+EFG++VD  RA LA+LG+  GD VG+I+NNR EWAVCA+AT+ LGA +VPMYE ++++
Sbjct:    8 DNLVDFLEGSVAKYPENPLFGT-KNDRGE-YEWITYREFGRRVDNLRAGLAQLGVQRGDAVGLIANNRVEWAVCAFATFGLGARWVPMYEAELTQ 100          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62839.17021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW39_9PHAE6.050e-5998.95AMP-binding domain-containing protein n=2 Tax=Ecto... [more]
A0A835ZGH2_9STRA1.260e-3870.83Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
A0A0G3A2D5_9DELT1.730e-2553.13Long-chain acyl-CoA synthetase n=3 Tax=Archangium ... [more]
A0A4Y6PWS5_9DELT3.250e-2548.98Long-chain fatty acid--CoA ligase n=1 Tax=Persicim... [more]
UPI00194DED164.450e-2553.76long-chain fatty acid--CoA ligase n=1 Tax=Archangi... [more]
A0A2E0TCA1_9DELT6.090e-2553.19Long-chain fatty acid--CoA ligase n=1 Tax=Sandarac... [more]
A0A5B8XPQ5_9DELT1.120e-2452.63Long-chain fatty acid--CoA ligase n=1 Tax=Bradymon... [more]
A0A485LZ48_9ZZZZ1.540e-2448.42Long-chain-fatty-acid--CoA ligase FadD15 n=1 Tax=a... [more]
A0A4U0ZNL9_9DELT1.550e-2452.69Long-chain fatty acid--CoA ligase n=1 Tax=Desulfor... [more]
A0A1V5H8B5_9DELT2.120e-2452.63Long-chain-fatty-acid--CoA ligase FadD15 n=1 Tax=D... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042099AMP-dependent synthetase-like superfamilyGENE3D3.40.50.12780coord: 2..98
e-value: 2.7E-15
score: 57.8
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 32..94
e-value: 1.7E-15
score: 56.5
NoneNo IPR availablePANTHERPTHR43272FAMILY NOT NAMEDcoord: 14..94
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 5..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62839contigEcto-sp13_S_contig62839:16..309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62839.17021.1mRNA_Ecto-sp13_S_contig62839.17021.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62839 16..309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62839.17021.1 ID=prot_Ecto-sp13_S_contig62839.17021.1|Name=mRNA_Ecto-sp13_S_contig62839.17021.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
MDYDTLVDMHLITRQTFGNRPLFGTQKGDKDSPFEWLTYKEFGKQVDRCR
AALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQVSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042099AMP-dep_Synthh-like_sf
IPR000873AMP-dep_Synth/Lig