prot_Ecto-sp13_S_contig6279.17016.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6279.17016.1
Unique Nameprot_Ecto-sp13_S_contig6279.17016.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6279.17016.1 vs. uniprot
Match: D7FWU7_ECTSI (EF-hand, calcium binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU7_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 4.580e-7
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 0 
Query:   71 MSERAPWLAGSSRGSNNNSGGRKGSSLETATKVLAS 106
            MSERAPW AGSSRGSNN SGGR+GSSLETATK LAS
Sbjct:    1 MSERAPWPAGSSRGSNN-SGGRRGSSLETATKGLAS 35
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6279.17016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWU7_ECTSI4.580e-788.89EF-hand, calcium binding motif n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6279contigEcto-sp13_S_contig6279:5704..6726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6279.17016.1mRNA_Ecto-sp13_S_contig6279.17016.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6279 5704..6726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6279.17016.1 ID=prot_Ecto-sp13_S_contig6279.17016.1|Name=mRNA_Ecto-sp13_S_contig6279.17016.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
RDSSARGSRASGRRGPADGAEDDGGGAAAAAVRRLSMTSGRDGFSLVPAF
SGNVAVDGGVDSSRLTWTNPMSERAPWLAGSSRGSNNNSGGRKGSSLETA
TKVLAS
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