prot_Ecto-sp13_S_contig62741.17010.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62741.17010.1
Unique Nameprot_Ecto-sp13_S_contig62741.17010.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length42
Homology
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A6H5JAP6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAP6_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.700e-17
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKV 37
            MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDK 
Sbjct:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKT 37          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: D7FXR6_ECTSI (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR6_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 9.390e-17
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKV 37
            MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDK 
Sbjct:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKT 37          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A835YYV2_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYV2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.730e-9
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKV 37
            M++L   A LEGH ER W VAWSPDG+LLASCSSDK 
Sbjct:    1 MAKLSLLATLEGHEERAWFVAWSPDGKLLASCSSDKT 37          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A0B7APJ6_9EUPU (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7APJ6_9EUPU)

HSP 1 Score: 57.8 bits (138), Expect = 1.300e-8
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKV 37
            M  L+E   L GHT+RVWCV+WSP+G LLASC  DK 
Sbjct:    1 MQTLKEYQTLNGHTDRVWCVSWSPNGSLLASCGGDKT 37          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A5J4YI89_9CHLO (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YI89_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 2.360e-8
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKV 37
            M+RL +T  LEGHT+RVW VAWSP G  +ASCS DK 
Sbjct:    1 MARLEQTQVLEGHTDRVWNVAWSPKGDSIASCSGDKT 37          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A6P7SB17_OCTVU (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SB17_OCTVU)

HSP 1 Score: 57.0 bits (136), Expect = 2.450e-8
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    4 LRETAALEGHTERVWCVAWSPDGRLLASCSSDK 36
            ++ET +L GH E+VWCVAW PDGRLLAS  SDK
Sbjct:    5 MQETTSLSGHEEQVWCVAWDPDGRLLASSGSDK 37          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A2V0PR28_9CHLO (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PR28_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 2.530e-8
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0
Query:   10 LEGHTERVWCVAWSPDGRLLASCSSDKV 37
            LEGH ERVWCVAWSPDG  LASCS+DK 
Sbjct:   15 LEGHDERVWCVAWSPDGSTLASCSADKT 42          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A267FMV6_9PLAT (Uncharacterized protein (Fragment) n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FMV6_9PLAT)

HSP 1 Score: 56.6 bits (135), Expect = 3.350e-8
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0
Query:   10 LEGHTERVWCVAWSPDGRLLASCSSDKV 37
            L+GH++RVWCVAWSPDGRLLA+C  DK 
Sbjct:    9 LDGHSDRVWCVAWSPDGRLLATCGGDKT 36          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: V3ZFT4_LOTGI (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZFT4_LOTGI)

HSP 1 Score: 56.6 bits (135), Expect = 3.350e-8
Identity = 24/37 (64.86%), Postives = 24/37 (64.86%), Query Frame = 0
Query:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKV 37
            M RL E     GH E VWCVAWSP G LLASCS DK 
Sbjct:    1 MFRLEEITTFTGHNEAVWCVAWSPSGSLLASCSGDKT 37          
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Match: A0A1I8GKD2_9PLAT (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GKD2_9PLAT)

HSP 1 Score: 56.6 bits (135), Expect = 3.480e-8
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 0
Query:   10 LEGHTERVWCVAWSPDGRLLASCSSDKV 37
            L+GH++RVWCVAWSPDGRLLA+C  DK 
Sbjct:   11 LDGHSDRVWCVAWSPDGRLLATCGGDKT 38          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62741.17010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAP6_9PHAE4.700e-1797.30Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FXR6_ECTSI9.390e-1797.30Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A835YYV2_9STRA2.730e-970.27Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A0B7APJ6_9EUPU1.300e-862.16Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A5J4YI89_9CHLO2.360e-864.86Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A6P7SB17_OCTVU2.450e-869.70Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A2V0PR28_9CHLO2.530e-882.14Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A267FMV6_9PLAT3.350e-875.00Uncharacterized protein (Fragment) n=2 Tax=Macrost... [more]
V3ZFT4_LOTGI3.350e-864.86Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A1I8GKD2_9PLAT3.480e-875.00Probable cytosolic iron-sulfur protein assembly pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 3..41
e-value: 1.9E-5
score: 34.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 9..36
e-value: 6.7E-8
score: 33.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 10..35
score: 10.107
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..37
e-value: 1.4E-12
score: 49.5
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 10..41
score: 9.362
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 7..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62741contigEcto-sp13_S_contig62741:235..360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62741.17010.1mRNA_Ecto-sp13_S_contig62741.17010.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62741 235..369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62741.17010.1 ID=prot_Ecto-sp13_S_contig62741.17010.1|Name=mRNA_Ecto-sp13_S_contig62741.17010.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDKVGHAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf