prot_Ecto-sp13_S_contig627.17004.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig627.17004.1
Unique Nameprot_Ecto-sp13_S_contig627.17004.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length795
Homology
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BLAST of mRNA_Ecto-sp13_S_contig627.17004.1 vs. uniprot
Match: D8LAW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW1_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 3.080e-202
Identity = 326/373 (87.40%), Postives = 332/373 (89.01%), Query Frame = 0 
Query:  415 MSSLDRFPRGWLFSEEGIREREATPGPEAYDVGLENRLEGCSFEKMYGSLETLASWGRLGASRAGEGGCSNDEVAADGKVRESENTKKRTSPAECRSKSGNGGVEEEGYAKDRQSAAELAEQNYFRRSHAPCVAGQSTLSLPAKLETNSVRRSSNGRRQHCSRLSPASSVAACRDVPCPDCASIEVATAAGTFAAASASLSDANLFRRAKTIGASVRFGDMPRLRSAPAFTIGRGQRDVSSRLLHTTPAEALYKEDRLGRSGNGPTTASPRAGERLTRPRPIAARVVLPKQAPRASAGGGSEGGKSAAPAXXAAGGEGVMEVAERGVIVVDGALGTQVKSCRPSSPSFTLAGPRRAATLFHERLRYDGKVSEV 787
            MSSLDRFPRG LFSEE IREREATPGPEAYDVGLENRLEGCSFEKMYGSLETLASWG LGASRAG G CSND+VAADG V ESENT K T+     SKSGNGGVEEEGYAKDRQS AELAE+N  RRSHAPCVAGQSTLS PAKLETNS RRSSNGRRQHCSRLSPASSVAACR VPCPDCAS+EVATAAGTFAAASASLSDANLFRRA+TIGASVRFGDMPRLRSAPAFTIGRGQRDVSSRLLHTTPAEALYKEDRLGRSG GPTTASPRAGERLTRPRPIAARVVLPKQ PRASAGGGSE        XX       MEVAERGVIVVDGALGTQVKS RP+SPSFTLAGPRRAATLFHERLRYDGK   V
Sbjct:    1 MSSLDRFPRGRLFSEEEIREREATPGPEAYDVGLENRLEGCSFEKMYGSLETLASWGSLGASRAGGGVCSNDKVAADGIVHESENTNKGTNI----SKSGNGGVEEEGYAKDRQSVAELAERNSSRRSHAPCVAGQSTLSSPAKLETNSARRSSNGRRQHCSRLSPASSVAACRGVPCPDCASVEVATAAGTFAAASASLSDANLFRRARTIGASVRFGDMPRLRSAPAFTIGRGQRDVSSRLLHTTPAEALYKEDRLGRSGKGPTTASPRAGERLTRPRPIAARVVLPKQGPRASAGGGSEXXXXXXXXXXXX----XMEVAERGVIVVDGALGTQVKSRRPTSPSFTLAGPRRAATLFHERLRYDGKALSV 365
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig627.17004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAW1_ECTSI3.080e-20287.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig627contigEcto-sp13_S_contig627:20305..22964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig627.17004.1mRNA_Ecto-sp13_S_contig627.17004.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig627 20164..22964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig627.17004.1 ID=prot_Ecto-sp13_S_contig627.17004.1|Name=mRNA_Ecto-sp13_S_contig627.17004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=795bp
MPHSSSEETQDIPEQQPHGSTSAEAQKNHTVILPAKVPGPGPGDYNVTPP
AIGQNGHAVRFGYPGLGRKYPPRTPDQPRAEIPCTYAEPAHVSSLHNQLT
SDRATSYAVFFGGVPRFQKKRSVSNQAKDLLHFADTKPAGRRSPMVATAS
GFTTSTASPSGPGPGDYDVAHHAVGQNGPAITFGDPALGGKRYPPRTQDQ
PRAEVPCTYAEPGHISCLRHQLTSDRPTSPAVFFGGAPRFQQERRKRSEA
RIDATSQRKPAGQTRAKSSSALRPGNALPQPISTTDSRRRKKRRKRRWGG
PRIFRRGNYGWLTSCAEPRQWEPQLKLLEDKDKGSGGNPATPISDVSRTW
SLTEKNAPRPVLRRGERYNQSEYNPQHRDLPREKDGYPGPKYDRPPGAFG
RTGGGGGTVAPSASMSSLDRFPRGWLFSEEGIREREATPGPEAYDVGLEN
RLEGCSFEKMYGSLETLASWGRLGASRAGEGGCSNDEVAADGKVRESENT
KKRTSPAECRSKSGNGGVEEEGYAKDRQSAAELAEQNYFRRSHAPCVAGQ
STLSLPAKLETNSVRRSSNGRRQHCSRLSPASSVAACRDVPCPDCASIEV
ATAAGTFAAASASLSDANLFRRAKTIGASVRFGDMPRLRSAPAFTIGRGQ
RDVSSRLLHTTPAEALYKEDRLGRSGNGPTTASPRAGERLTRPRPIAARV
VLPKQAPRASAGGGSEGGKSAAPAAPAAGGEGVMEVAERGVIVVDGALGT
QVKSCRPSSPSFTLAGPRRAATLFHERLRYDGKVSEVHSFFSGG*
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