prot_Ecto-sp13_S_contig6247.16978.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig6247.16978.1
Unique Name	prot_Ecto-sp13_S_contig6247.16978.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	65

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6247.16978.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 7.490e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0

Query:    1 MQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTRAC 65
            MQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQT AC
Sbjct:  254 MQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLAC 318

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BLAST of mRNA_Ecto-sp13_S_contig6247.16978.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.590e-37
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0

Query:    1 MQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTRAC 65
            MQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQT AC
Sbjct:  314 MQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLAC 378

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BLAST of mRNA_Ecto-sp13_S_contig6247.16978.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 4.320e-18
Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 0

Query:    6 RIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTRAC 65
            R++R  P  F L+KGEFW A HR FCEY   SPDNVAR+L AYF  +RISDES+FQT  C
Sbjct:  297 RVERPLPNLFTLFKGEFWVALHRDFCEYVHESPDNVARSLQAYFAKFRISDESFFQTTLC 356

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BLAST of mRNA_Ecto-sp13_S_contig6247.16978.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.750e-15
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0

Query:   15 FRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTRAC 65
            F +YKGEFW   HRSFC+Y   SPDNVAR+L AYF+ +RISDESYFQT  C
Sbjct:  346 FTVYKGEFWVILHRSFCKYLEASPDNVARSLQAYFSKFRISDESYFQTVLC 396

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6247.16978.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6247.16978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5KBR7_9PHAE	7.490e-38	98.46	GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D8LDZ1_ECTSI	1.590e-37	98.46	Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus...	[more]
A0A6H5L1U8_9PHAE	4.320e-18	63.33	GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
A0A6H5L6Q9_9PHAE	1.750e-15	68.63	Protein xylosyltransferase n=2 Tax=Ectocarpus TaxI...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45719	FAMILY NOT NAMED	coord: 8..65

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6247	contig	Ecto-sp13_S_contig6247:8122..8316 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6247.16978.1	mRNA_Ecto-sp13_S_contig6247.16978.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig6247 8122..8316 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig6247.16978.1 ID=prot_Ecto-sp13_S_contig6247.16978.1|Name=mRNA_Ecto-sp13_S_contig6247.16978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
MQTLGRIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFT
GYRISDESYFQTRAC