prot_Ecto-sp13_S_contig6241.16969.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6241.16969.1
Unique Nameprot_Ecto-sp13_S_contig6241.16969.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6241.16969.1 vs. uniprot
Match: D7G9I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I6_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 5.000e-32
Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0 
Query:    1 MFGSPPAGARQGMNPPXXXXXXXXXXXXXXXXXXXXXXXXXDGGTATGTSSAQEFMQQQRGHQRQHGNAEDVEELSFDEPAMAPVNPGPLPTRLGTGF 98
            MFGSPPAGARQG++PPXXXXXXXXXXXXXXXXXXXX     DG TATG SSAQEFMQQQRGHQRQHGNAE+ EELSFDEPAMAPVN GPLPTRLGTGF
Sbjct:    1 MFGSPPAGARQGVSPPXXXXXXXXXXXXXXXXXXXXQEQRKDGDTATGRSSAQEFMQQQRGHQRQHGNAENGEELSFDEPAMAPVNSGPLPTRLGTGF 98
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6241.16969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9I6_ECTSI5.000e-3287.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6241contigEcto-sp13_S_contig6241:6970..7624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6241.16969.1mRNA_Ecto-sp13_S_contig6241.16969.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6241 6941..7624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6241.16969.1 ID=prot_Ecto-sp13_S_contig6241.16969.1|Name=mRNA_Ecto-sp13_S_contig6241.16969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
MFGSPPAGARQGMNPPPSPPPPPPPRFRFRAGAAGQQEQRQDGGTATGTS
SAQEFMQQQRGHQRQHGNAEDVEELSFDEPAMAPVNPGPLPTRLGTGF
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