prot_Ecto-sp13_S_contig6237.16966.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6237.16966.1
Unique Nameprot_Ecto-sp13_S_contig6237.16966.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6237.16966.1 vs. uniprot
Match: A0A6H5KXC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC9_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.590e-75
Identity = 138/176 (78.41%), Postives = 148/176 (84.09%), Query Frame = 0 
Query:   33 KVVGPVRQSQLPLFPMFCSSICRSLAALAGERDRALRSLAAEEDRRRDMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAASEEEGDGGQERGRAWVLEQLRQCLFARVAVQDQLRSSADEIAADMFESEEGLMGFQVGPGGGQDAEGASPISRPPPPADVAVAAAGPGADG 208
            + +   R++Q        + + RSLAALAGER            RRR+MIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAASEEEGDGGQERGRAWVLEQ+RQCLFA+VAVQDQLRSSADEIAADMFE+EEGLMGFQVGPGGGQDAEGASPISRPPPP DVAVAA GPGADG
Sbjct:   27 RALAEQRKTQEQELDSLSNVLQRSLAALAGERXXXXXXXXXXXXRRRNMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAASEEEGDGGQERGRAWVLEQVRQCLFAKVAVQDQLRSSADEIAADMFEAEEGLMGFQVGPGGGQDAEGASPISRPPPPTDVAVAAVGPGADG 202
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BLAST of mRNA_Ecto-sp13_S_contig6237.16966.1 vs. uniprot
Match: D8LD17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD17_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.670e-25
Identity = 76/155 (49.03%), Postives = 88/155 (56.77%), Query Frame = 0 
Query:   33 KVVGPVRQSQLPLFPMFCSSICRSLAALAGERDRALRSLAAEEDRRRDMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAASEEEGDGGQERGRAWVLEQLRQCLFARVAVQDQLRSSADEIAADMFESEEGLMGFQVGPGGGQDAEGASP 187
            + +   R++Q          + RSLAALAGERD           RRRDMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAA        QERGRAWVLE++ Q     + V+   R    + AA +      L G   G G G+  E   P
Sbjct:   27 RALAEQRKTQEEELDSLSDVLQRSLAALAGERDXXXXXXXXXXXRRRDMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAAXXXXXXXXQERGRAWVLERVEQLEALALEVR---RGEGKKRAAAVA-----LAGVGEGGGAGEAVESGEP 173
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6237.16966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXC9_9PHAE1.590e-7578.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD17_ECTSI1.670e-2549.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6237contigEcto-sp13_S_contig6237:1061..2109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6237.16966.1mRNA_Ecto-sp13_S_contig6237.16966.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6237 963..2109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6237.16966.1 ID=prot_Ecto-sp13_S_contig6237.16966.1|Name=mRNA_Ecto-sp13_S_contig6237.16966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
MEQVEGMDAIANPNFPDCMLYPTCYTQCNKPAKVVGPVRQSQLPLFPMFC
SSICRSLAALAGERDRALRSLAAEEDRRRDMIEELTSLLGGELSCGDVSR
LAMGLERIEREAGPAAASEEEGDGGQERGRAWVLEQLRQCLFARVAVQDQ
LRSSADEIAADMFESEEGLMGFQVGPGGGQDAEGASPISRPPPPADVAVA
AAGPGADG
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