prot_Ecto-sp13_S_contig6180.16882.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6180.16882.1
Unique Nameprot_Ecto-sp13_S_contig6180.16882.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1334
Homology
BLAST of mRNA_Ecto-sp13_S_contig6180.16882.1 vs. uniprot
Match: A0A6H5KB40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB40_9PHAE)

HSP 1 Score: 1600 bits (4142), Expect = 0.000e+0
Identity = 1050/1388 (75.65%), Postives = 1070/1388 (77.09%), Query Frame = 0
Query:    1 MLLQVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFVAERRAAARAYASCLCAHRSSXXXXXXXXXXXXXXXXXXX--PGLTPRTLEEMSALSSALLPLLSCEGGDARVSAWCGEGGGREGGGFSPRGVEELLEAVLWKVSGDLPSTELWESLKVFLLDEDTSTSETQLNVTALVDLVLHRLRSNSSAXXXXXXXXXXXXPGASNPALRAMAVDFFVSLIHVEAVERSKFAMAAAEAAVEAAAVAEREELARKQEAQDDPRKNEDAPSAGGG-SAAKATPRATPPTPGRSSVWRLLDAFSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHDFGDAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------ACASSLVSYSVAAFRETPFYPADGGISDSAARRDKALAALAEFAAEGVLSSLPVLRLLSSRGIGGGGPAA-AAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALSVELAVLVSHVVRAGEGDDKGGGGAGAGS--EWLGDLERVLWELLFGRRFCDDNPKAREXXXXXXXXXXXXXXXXXXGIAVALMRHHRGSLSRQSTLSSALVGAMGGGCGSGMASDNDAGSPSSAAASGGEGXXXXXXXXXXGAEAGKRNLVEPEGTDPIVLDPWYQLVLCRECMLHGFFEAAGAGLRRLRDRGRRKGGGAVPPASDTVWAWTEVLGKVAEAEAFFGGSPDPVAAHACAAHETALAAELLASIPRRSAGPRGTGRRSPSAQPQSVSAAAAGHGSEGGVAGVFRGGGGG-DLFAFQRGFLLARAELLRLLGACWGMCQ----------------------DLSATRTNRYARNSRREARCXXXXXXXXXXARDFRLLRGFAPGAGSTTSEPLRAASCLCLFLAIAADALLSQGKSVFVGSREKGSNKKKTWRGWLERLVAAGAEEEEEDRVGGGETEGALLKAVRLLGSRLLGLSDPPKASIGRVAFSSILESVRGTPFPIPRAFFRTGVSPRVALSALPPAPAAGLGGPDGVAADGTSSAPWVGQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSVGEKRQRRDGGAGARYYGPSCRLRADVAEAERSRRPRLPLISAAPAVSTAAGSSPPLSYXXXXXXXXXXXXXXXXXXXXXRRNPSCLSFSASEAWWAQLVREEVMLAAAAPAAPSGQAGVGAGGTWRAHAVGQTMGPGVWLLQGTVCRGRGTGGVLPAVSEVVLKISVELPPAAVASRGAADSLRAQGDSKREISTSTRKWSKEVVAELFGAPADSSTALCFRAQVHLPAFSPPSLPAARNG 1333
            + ++VAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPF+AERRAAARAYASC+CAHRS XXXXXXXXXXXXXXXXXXX  P LTPRTLEEMSALSSALLPLLSCEGGDARVS W G GGGREGGGF PR VEELLEAVLWKVS                                                         XX      ALRAMAVDFFVSLIH+EAVERSKFAMAAAEAAV+                           S G   S AKA PRATPPTPGRSSVWRLLDAFSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAH FGDA G  XXXXXXXXXXXX                                                      ACASSLVSYSVAAFRETPFYPADGG+SDSAARR+KALAALAEFAAEGVLSSLPVLRLLSSRGIGGGGPAA AAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSAL+VELAVLVSHVVRAGE DDKGGGG GAG+  E LGDLE+                                      GIAVALMRHHRGSLSRQSTLSSALVGAMG                      GGEG          GAEAGKR   EPEGTDPIVLD WYQLVLCRECMLHGFFEAAGAGLRRLR+ GRRKGGGAV PASDTVWAWTEVLGKV+ AEAFFGGSPDPVAAHACAAHETALAAELLASIPRRSAGP GT RRSPSAQPQSV+AAAAGH  EGGVAGVFRGGGGG DLFAFQRGFLLARAELLRLLGACWGMCQ                       +    T R A  SRREARC       XX ARDFRLLRGFAPGAGSTTSEPLRAASCLCLFLAIAADALLSQGKSVFVGSREK +NKKKTWRGWLERLVAAGA+EEEEDRVGGGETEGALLKAVRLLGSRLLGLSDPPKASIGRVAFSSILESVRGTPFPIPRAFFRTGVSPRVALSALPPAPAAGL GPD VAADGT SAPW GQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MSVGEKRQRRDGGAGARYYGPSCRLRADVAEAERSRRPRLPLISAAPAVSTAAGSSPPLSY XXXXXXXXXX          RRNPSCLSFSASEAWWAQLVREEVMLAAAAPAAPSGQAG GA G WRAHAVGQT G G+WLLQGTVCRGRGTGGVLPAVSEVVLKISVELPPAAVAS GAADSLRAQGD KREIS +TRKWSKEVVAELFGAPADSSTALCFRAQVHLPA SPPSLPAARNG
Sbjct:   44 LAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLAERRAAARAYASCMCAHRSXXXXXXXXXXXXXXXXXXXXXXPALTPRTLEEMSALSSALLPLLSCEGGDARVSGWRGGGGGREGGGFFPRDVEELLEAVLWKVSA--------------------------------------------------APAPAAXXXXXXXXALRAMAVDFFVSLIHMEAVERSKFAMAAAEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXTSGGASASTAKAAPRATPPTPGRSSVWRLLDAFSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHGFGDAAGGGXXXXXXXXXXXXGRVGEEAHALARIRFPLATAAVEAFRRLCTSPXXXXXXXXXXXXXXXXXXXXXXACASSLVSYSVAAFRETPFYPADGGVSDSAARREKALAALAEFAAEGVLSSLPVLRLLSSRGIGGGGPAAVAAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEVDDKGGGGEGAGTGGEKLGDLEKAA-----------------------------------VGIAVALMRHHRGSLSRQSTLSSALVGAMGXXXXXXXXXXXXXXXXXXXXXXGGEGDPGTAGVGCGGAEAGKRCPAEPEGTDPIVLDTWYQLVLCRECMLHGFFEAAGAGLRRLREGGRRKGGGAVLPASDTVWAWTEVLGKVSAAEAFFGGSPDPVAAHACAAHETALAAELLASIPRRSAGPWGTSRRSPSAQPQSVAAAAAGHRGEGGVAGVFRGGGGGGDLFAFQRGFLLARAELLRLLGACWGMCQVTTTMGVCLFWEAFRSQGGFGGSVKELATQRIANASRREARCRRLPAAFXXLARDFRLLRGFAPGAGSTTSEPLRAASCLCLFLAIAADALLSQGKSVFVGSREKANNKKKTWRGWLERLVAAGAQEEEEDRVGGGETEGALLKAVRLLGSRLLGLSDPPKASIGRVAFSSILESVRGTPFPIPRAFFRTGVSPRVALSALPPAPAAGLTGPDDVAADGTGSAPWGGQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MSVGEKRQRRDGGAGARYYGPSCRLRADVAEAERSRRPRLPLISAAPAVSTAAGSSPPLSYSXXXXXXXXXXP---------RRNPSCLSFSASEAWWAQLVREEVMLAAAAPAAPSGQAGFGASGIWRAHAVGQTGGAGMWLLQGTVCRGRGTGGVLPAVSEVVLKISVELPPAAVASGGAADSLRAQGDPKREISMATRKWSKEVVAELFGAPADSSTALCFRAQVHLPACSPPSLPAARNG 1335          
BLAST of mRNA_Ecto-sp13_S_contig6180.16882.1 vs. uniprot
Match: D8LGT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT4_ECTSI)

HSP 1 Score: 1499 bits (3880), Expect = 0.000e+0
Identity = 999/1357 (73.62%), Postives = 1014/1357 (74.72%), Query Frame = 0
Query:    1 MLLQVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFVAERRAAARAYASCLCAHRSSXXXXXXXXXXXXXXXXXXXPGLTPRTLEEMSALSSALLPLLSCEGGDARVSAWCGEGGGREGGGFSPRGVEELLEAVLWKVSGDLPSTELWESLKVFLLDEDTSTS-------ETQLNVTALVDLVLHRLRSNSSAXXXXXXXXXXXX-PGASNPALRAMAVDFFVSLIHVEAVERSKFAMAAAEAAVEAAAVAEREELARKQEAQDDPRKNEDAPSAGGGSAA---------KATPRATPPTPGRSSVWRLLDAFSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHDFGDAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACASSLVSYSVAAFRETPFYPADGGISDSAARRDKALAALAEFAAEGVLSSLPVLRLLSSRGIGGGGPAAAAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALSVELAVLVSHVVRAGEGDDKGGGGAGAG----SEWLGDLERVLWELLFGRRFCDDNPKAREXXXXXXXXXXXXXXXXXXGIAVALMRHHRGSLSRQSTLSSALVGAMGGGCGSGMASDNDAGSPSSAAASGGEGXXXXXXXXXX---GAEAGKRNLVEPEGTDPIVLDPWYQLVLCRECMLHGFFEAAGAGLRRLRDRGRRKGGGAVPPASDTVWAWTEVLGKVAEAEAFFGGSPDPVAAHACAAHETALAAELLASIPRRSAGPRGTGRRSPSAQPQSVSAAAAGHGSEGGVAGVFRGGGGGDLFAFQRGFLLARAELLRLLGACWGMCQDLSATRTNRYARNSRREARCXXXXXXXXXXARDFRLLRGFAPGAGSTTSEPLRAASCLCLFLAIAADALLSQGKSVFVGSREKGSNKKKTWRGWLERLVAAGAEEEEEDRVGGGETEGALLKAVRLLGSRLLGLSDPPKASIGRVAFSSILESVRGTPFPIPRAFFRTGVSPRVALSALPPAPAAGLGGPDGVAADGTSSAPWVGQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSVGEKRQRRDGGAGARYYGPSCRLRADVAEAERSRRPRLPLISAAPAVSTAAGSSPPLSYXXXXXXXXXXXXXXXXXXXXXRRNPSCLSFSASEAWWAQLVREEVMLAAAAPAAPSGQAGVGAGGTWRAHAVGQTMGPGVWLLQGTVCRGRGTGGVLPAVSEVVLKISVELPPAAVASRGAADSLRAQGDSKREISTSTRKWSKEVVAELFGAPADSSTALCFRAQVHLPAFSPPSLPAARNG 1333
            + ++VAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPF+A                                                                                                   VSGDLPSTELWESLKVFLLDEDTS         ETQLNVTALVDLVLHRLRSN   XXXXXXXXXXXX PGASNPALRAMAVDFFVSLIHVEAVERSKFAMAAAEAAVE                                            KA PRATPPTPGRSSVWRLLDA S ASEAHGEKAELLSVLGAPA+AVAVLEAEAVAGAKSAGKMA+                                                   ACASSLVSYS AAFRETPFYPADGGISDSAARRDKALAALAEFAA+GVLSSLPVLRLLSSRGI GGGPAAAAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSAL+VELAVLVSHVVRAGEGDDKG            E LGDLERVLWELLFGRRFCDDNPKA                    GIAVALMRHHRGSLSRQSTLSSALVGAMG                          XXXXXXXXXX   GAEAGKR   EPEGTDPIVLDPW+QLVLCRECMLHGFFEAAGAGLRRLRD GRRKGGGAV PASDTVWAWTEVLGKV+ AEAFFGGSPDPVAAHACAAHETALAAELLASIPRR AGP G GRRSPS QPQSV AAAAG G EGGVAGVFRGGGGGDLFAFQRGFLLARAELLRLLGACWGMCQDLSATRTNRYARNSRREARCXXXXXXXXXXARDFRLLRGFAPGAGSTTSEPLRAASCLCLFLAIAADALLSQGKSVFVGSREKGSNKKKTWRGWLERLVAAGAEEEEEDRVGGGETEGALLKAVRLLGSRLLGLSDPPKASIGRVAFSSILESVRGTPFPIPRAFFRTGVSPRVALSALPPAPAA L GPDGVAADGT SAPW GQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MSVGEKRQRRDGGAGARYYGPSCRLRADVAEAERSRRPRLPLISAAPAVSTAAGSSPPLS+        XXXXXXXXXXXXX                               A PSGQAGVGAGG WR+HAVGQT G GVWLLQGTVCRGRGTGGVLPAVSEVVLKISVELPPAAVAS G ADSLR+QGD KR IS +TRKWSKEVVAE+FGAPADSST LCFRAQVHLPAFSPPSLP ARNG
Sbjct:   72 LAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLA---------------------------------------------------------------------------------------------------VSGDLPSTELWESLKVFLLDEDTSXXXXXXXXXETQLNVTALVDLVLHRLRSNXXXXXXXXXXXXXXXXPGASNPALRAMAVDFFVSLIHVEAVERSKFAMAAAEAAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPRATPPTPGRSSVWRLLDAVSAASEAHGEKAELLSVLGAPAVAVAVLEAEAVAGAKSAGKMASTLSSSSV-----------------------------------------LLLACASSLVSYSGAAFRETPFYPADGGISDSAARRDKALAALAEFAADGVLSSLPVLRLLSSRGISGGGPAAAAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEGDDKGSXXXXXXXXXXGERLGDLERVLWELLFGRRFCDDNPKAA------------------VGIAVALMRHHRGSLSRQSTLSSALVGAMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGAEAGKRCPAEPEGTDPIVLDPWFQLVLCRECMLHGFFEAAGAGLRRLRDGGRRKGGGAVLPASDTVWAWTEVLGKVSAAEAFFGGSPDPVAAHACAAHETALAAELLASIPRRPAGPWGNGRRSPSVQPQSVPAAAAGQGGEGGVAGVFRGGGGGDLFAFQRGFLLARAELLRLLGACWGMCQDLSATRTNRYARNSRREARCXXXXXXXXXXARDFRLLRGFAPGAGSTTSEPLRAASCLCLFLAIAADALLSQGKSVFVGSREKGSNKKKTWRGWLERLVAAGAEEEEEDRVGGGETEGALLKAVRLLGSRLLGLSDPPKASIGRVAFSSILESVRGTPFPIPRAFFRTGVSPRVALSALPPAPAASLTGPDGVAADGTGSAPWGGQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MSVGEKRQRRDGGAGARYYGPSCRLRADVAEAERSRRPRLPLISAAPAVSTAAGSSPPLSHSSRCPNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ATPSGQAGVGAGGIWRSHAVGQTGGAGVWLLQGTVCRGRGTGGVLPAVSEVVLKISVELPPAAVASGGGADSLRSQGDPKRGISAATRKWSKEVVAEMFGAPADSSTVLCFRAQVHLPAFSPPSLPTARNG 1260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6180.16882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KB40_9PHAE0.000e+075.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGT4_ECTSI0.000e+073.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6180contigEcto-sp13_S_contig6180:3..8413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6180.16882.1mRNA_Ecto-sp13_S_contig6180.16882.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6180 3..8413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6180.16882.1 ID=prot_Ecto-sp13_S_contig6180.16882.1|Name=mRNA_Ecto-sp13_S_contig6180.16882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1334bp
MLLQVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRS
LRSPFVAERRAAARAYASCLCAHRSSPSPPPPSSSLGSGGPSPSPPGLTP
RTLEEMSALSSALLPLLSCEGGDARVSAWCGEGGGREGGGFSPRGVEELL
EAVLWKVSGDLPSTELWESLKVFLLDEDTSTSETQLNVTALVDLVLHRLR
SNSSASGQASAAAAAAAPGASNPALRAMAVDFFVSLIHVEAVERSKFAMA
AAEAAVEAAAVAEREELARKQEAQDDPRKNEDAPSAGGGSAAKATPRATP
PTPGRSSVWRLLDAFSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGA
KSAGKMAAAHDFGDAPGGGGGGGNGGSGAFRRLCTSPPPSTTTSPSSSST
LSSSSVVLLACASSLVSYSVAAFRETPFYPADGGISDSAARRDKALAALA
EFAAEGVLSSLPVLRLLSSRGIGGGGPAAAAGARLLLPQLRALAAVHAWP
RQRVALAVARSLRRVPPTSALSVELAVLVSHVVRAGEGDDKGGGGAGAGS
EWLGDLERVLWELLFGRRFCDDNPKARERERERERERERAKRRAAVGIAV
ALMRHHRGSLSRQSTLSSALVGAMGGGCGSGMASDNDAGSPSSAAASGGE
GDPGTGAAGSGGAEAGKRNLVEPEGTDPIVLDPWYQLVLCRECMLHGFFE
AAGAGLRRLRDRGRRKGGGAVPPASDTVWAWTEVLGKVAEAEAFFGGSPD
PVAAHACAAHETALAAELLASIPRRSAGPRGTGRRSPSAQPQSVSAAAAG
HGSEGGVAGVFRGGGGGDLFAFQRGFLLARAELLRLLGACWGMCQDLSAT
RTNRYARNSRREARCRRLPAAFRRLARDFRLLRGFAPGAGSTTSEPLRAA
SCLCLFLAIAADALLSQGKSVFVGSREKGSNKKKTWRGWLERLVAAGAEE
EEEDRVGGGETEGALLKAVRLLGSRLLGLSDPPKASIGRVAFSSILESVR
GTPFPIPRAFFRTGVSPRVALSALPPAPAAGLGGPDGVAADGTSSAPWVG
QPPPPSHQQAFDDFPPPSSSSPVAMAATADDPSGGGGGGMSVGEKRQRRD
GGAGARYYGPSCRLRADVAEAERSRRPRLPLISAAPAVSTAAGSSPPLSY
SSRPPNSGGGGGGGGGGGGGPRRNPSCLSFSASEAWWAQLVREEVMLAAA
APAAPSGQAGVGAGGTWRAHAVGQTMGPGVWLLQGTVCRGRGTGGVLPAV
SEVVLKISVELPPAAVASRGAADSLRAQGDSKREISTSTRKWSKEVVAEL
FGAPADSSTALCFRAQVHLPAFSPPSLPAARNGG
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