prot_Ecto-sp13_S_contig6099.16764.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6099.16764.1
Unique Nameprot_Ecto-sp13_S_contig6099.16764.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6099.16764.1 vs. uniprot
Match: D7FL13_ECTSI (Membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase (Myt1 kinase) n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL13_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 6.680e-15
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0 
Query:    1 MGPAGAMAFDTMSANPVLGAPGQDVVSMTVVLLMACLKKKRRGSNLFTQQ 50
            MG +GAMAF+TMSA+PVLGAP QDVVS+ VVLLM CLK++RR SNLFTQQ
Sbjct:  802 MGTSGAMAFETMSADPVLGAPAQDVVSVAVVLLMVCLKRERRCSNLFTQQ 851
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BLAST of mRNA_Ecto-sp13_S_contig6099.16764.1 vs. uniprot
Match: A0A6H5JWE9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE9_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.340e-14
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:    1 MGPAGAMAFDTMSANPVLGAPGQDVVSMTVVLLMACLKKKRRGSNLFTQ 49
            MG +GAMAF+TMSA+PVLGAP QDVVS+ VVLLM CLK++RR SNLFTQ
Sbjct: 1167 MGTSGAMAFETMSADPVLGAPAQDVVSVAVVLLMVCLKRERRCSNLFTQ 1215
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6099.16764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FL13_ECTSI6.680e-1578.00Membrane-associated tyrosine-and threonine-specifi... [more]
A0A6H5JWE9_9PHAE2.340e-1477.55Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6099contigEcto-sp13_S_contig6099:2386..3342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6099.16764.1mRNA_Ecto-sp13_S_contig6099.16764.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6099 1360..3343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6099.16764.1 ID=prot_Ecto-sp13_S_contig6099.16764.1|Name=mRNA_Ecto-sp13_S_contig6099.16764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
MGPAGAMAFDTMSANPVLGAPGQDVVSMTVVLLMACLKKKRRGSNLFTQQ
EDSRLSARERQPGHQRTHGTILVVPQAGAKP*
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