prot_Ecto-sp13_S_contig6054.16696.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6054.16696.1
Unique Nameprot_Ecto-sp13_S_contig6054.16696.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length101
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6054.16696.1 vs. uniprot
Match: A0A6H5KDQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ5_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.760e-43
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0 
Query:   24 MCDTGPVPPSPCVRPLLSALHLWRVTPTQESLRKIIRPSKEQLPIVLRATRMAGRKVVLSVWAVSDGEAMTVSVYDHK 101
            MCDTGPVPPSPCVRPLLSALHLWRVTPT+ESLRKIIRPSK QLPIVLRATRMAGRKVVLSVWAVSDGEAMTVSVYDHK
Sbjct:    1 MCDTGPVPPSPCVRPLLSALHLWRVTPTEESLRKIIRPSKGQLPIVLRATRMAGRKVVLSVWAVSDGEAMTVSVYDHK 78
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BLAST of mRNA_Ecto-sp13_S_contig6054.16696.1 vs. uniprot
Match: D8LGS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS7_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.700e-41
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0 
Query:   24 MCDTGPVPPSPCVRPLLSALHLWRVTPTQESLRKIIRPSKEQLPIVLRATRMAGRKVVLSVWAVSDGEAMTVSVYDHK 101
            MCDTGPVPPSPC RPLLSALHLWRVTPTQESLRKIIRPSK QLPIVLRATRMAGRKVVLSVWAVSDGEA+TVSVYDHK
Sbjct:    1 MCDTGPVPPSPCARPLLSALHLWRVTPTQESLRKIIRPSKGQLPIVLRATRMAGRKVVLSVWAVSDGEAITVSVYDHK 78
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6054.16696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDQ5_9PHAE1.760e-4397.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGS7_ECTSI2.700e-4196.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.671

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6054contigEcto-sp13_S_contig6054:4166..5002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6054.16696.1mRNA_Ecto-sp13_S_contig6054.16696.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6054 4166..5004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6054.16696.1 ID=prot_Ecto-sp13_S_contig6054.16696.1|Name=mRNA_Ecto-sp13_S_contig6054.16696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp
VALNILCLLAFLSRSSPSFLPYFMCDTGPVPPSPCVRPLLSALHLWRVTP
TQESLRKIIRPSKEQLPIVLRATRMAGRKVVLSVWAVSDGEAMTVSVYDH
K
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